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作为作用于DNA分子的物质,去氧胆酸(DOC)和阿霉素(DOX)之间的协同效应及竞争关系:采用共聚焦拉曼光谱和分子对接技术进行研究。

Synergistic effects and competitive relationships between DOC and DOX as acting on DNA molecules: Studied with confocal Raman spectroscopy and molecular docking technology.

作者信息

Zhou Suli, Feng Xiaoqiang, Bai Jintao, Sun Dan, Yao Baoli, Wang Kaige

机构信息

Key Laboratory of Photoelectronic Technology of Shaanxi Province, National Center for International Research of Photoelectric Technology & Nano-Functional Materials and Application, Institute of Photonics and Photon-Technology, Northwest University, Xi'an, 710127, China.

State Key Laboratory of Transient Optics and Photonics, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, 710119, China.

出版信息

Heliyon. 2024 Apr 23;10(9):e30233. doi: 10.1016/j.heliyon.2024.e30233. eCollection 2024 May 15.

DOI:10.1016/j.heliyon.2024.e30233
PMID:38707315
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11066432/
Abstract

Docetaxel (DOC) is one of the second-generation antineoplastic drugs of the taxanes family with excellent antitumor activity. However, the mechanism of DOC inducing tumor cell apoptosis and treating cancer diseases, especially its interaction with DNA in the nucleus, and its adjuvant or combined Doxorubicin (DOX) acting on DNA molecules are unclear. In this study, the interaction mechanism between DOC and DNA, as well as the synergistic effects and competitive relationships among DOC and DOX when they simultaneously interact with DNA molecules were studied by laser confocal Raman spectroscopy combined with UV-visible absorption spectroscopy and molecular docking technology. The spectroscopic results showed that the binding constant of DOC to DNA is 5.25 × 10 M, the binding modes of DOC and DNA are non-classical intercalation and electrostatic binding, and the DNA-DOC complex has good stability. When DOC or DOX interacts with DNA alone, both of them can bind with bases and phosphate backbone of DNA, and also lead to DNA conformation changes; when DOC and DOX interact with DNA at the same time, the orders of interaction not only affect their binding sites with DNA, but also cause changes in the surrounding environment of the binding sites. In addition, the molecular docking results further verified that DOC and DOX have synergy and competition when they interact with DNA molecules simultaneously. The docking energies of DNA-DOC and DNA-DOX indicate the important role of van der Waals forces and hydrogen bonds. This study has practical significance for the design and development of antitumor drugs with less toxic based on the taxanes family and the combination with other drugs for the treatment of cancer.

摘要

多西他赛(DOC)是紫杉烷类家族的第二代抗肿瘤药物之一,具有出色的抗肿瘤活性。然而,DOC诱导肿瘤细胞凋亡及治疗癌症疾病的机制尚不清楚,尤其是其与细胞核中DNA的相互作用,以及其与阿霉素(DOX)联合作用于DNA分子时的辅助作用或协同作用。在本研究中,通过激光共聚焦拉曼光谱结合紫外可见吸收光谱和分子对接技术,研究了DOC与DNA之间的相互作用机制,以及DOC和DOX同时与DNA分子相互作用时的协同效应和竞争关系。光谱结果表明,DOC与DNA的结合常数为5.25×10 M,DOC与DNA的结合模式为非经典嵌入和静电结合,且DNA-DOC复合物具有良好的稳定性。当DOC或DOX单独与DNA相互作用时,它们均可与DNA的碱基和磷酸骨架结合,同时导致DNA构象变化;当DOC和DOX同时与DNA相互作用时,相互作用顺序不仅影响它们与DNA的结合位点,还会引起结合位点周围环境的变化。此外,分子对接结果进一步证实了DOC和DOX同时与DNA分子相互作用时具有协同性和竞争性。DNA-DOC和DNA-DOX的对接能表明了范德华力和氢键的重要作用。本研究对于基于紫杉烷类家族设计和开发低毒抗肿瘤药物以及与其他药物联合治疗癌症具有实际意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/529bb7f43ece/gr15.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/6f6b41a62cc1/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/c15f96cb1095/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/6aa9a9cb9bb6/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/18df56a6f016/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/fd2af60d5c76/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/45759cf378cd/gr8.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/fa0c746c6b7c/gr10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/9f46eceb23bf/gr11.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/0a491099d727/gr12.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6508/11066432/aa5ce8473ec6/gr13.jpg
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