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人类微生物组的另一块拼图:饮食调节下的肠道病毒组。

Another piece of puzzle for the human microbiome: the gut virome under dietary modulation.

作者信息

Zhao Fengxiang, Wang Jinfeng

机构信息

College of Food Science & Nutritional Engineering, China Agricultural University, Beijing 100083, China.

College of Food Science & Nutritional Engineering, China Agricultural University, Beijing 100083, China.

出版信息

J Genet Genomics. 2024 Oct;51(10):983-996. doi: 10.1016/j.jgg.2024.04.013. Epub 2024 May 6.

Abstract

The virome is the most abundant and highly variable microbial consortium in the gut. Because of difficulties in isolating and culturing gut viruses and the lack of reference genomes, the virome has remained a relatively elusive aspect of the human microbiome. In recent years, studies on the virome have accumulated growing evidence showing that the virome is diet-modulated and widely involved in regulating health. Here, we review the responses of the gut virome to dietary intake and the potential health implications, presenting changes in the gut viral community and preferences of viral members to particular diets. We further discuss how viral-bacterial interactions and phage lifestyle shifts shape the gut microbiota. We also discuss the specific functions conferred by diet on the gut virome and bacterial community in the context of horizontal gene transfer, as well as the import of new viral members along with the diet. Collating these studies will expand our understanding of the dietary regulation of the gut virome and inspire dietary interventions and health maintenance strategies targeting the gut microbiota.

摘要

病毒组是肠道中最为丰富且高度可变的微生物群落。由于肠道病毒分离培养存在困难以及缺乏参考基因组,病毒组一直是人类微生物组中相对难以捉摸的一个方面。近年来,关于病毒组的研究积累了越来越多的证据,表明病毒组受饮食调节并广泛参与健康调节。在此,我们综述肠道病毒组对饮食摄入的反应及其潜在的健康影响,呈现肠道病毒群落的变化以及病毒成员对特定饮食的偏好。我们进一步讨论病毒与细菌的相互作用以及噬菌体生活方式的转变如何塑造肠道微生物群。我们还讨论了在水平基因转移背景下饮食赋予肠道病毒组和细菌群落的特定功能,以及新病毒成员随饮食的引入。整理这些研究将扩展我们对肠道病毒组饮食调节的理解,并激发针对肠道微生物群的饮食干预和健康维持策略。

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