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探索肉牛汗腺特征的遗传控制以提高耐热性。

Exploring the genetic control of sweat gland characteristics in beef cattle for enhanced heat tolerance.

作者信息

Hernandez Aakilah S, Zayas Gabriel A, Rodriguez Eduardo E, Sarlo Davila Kaitlyn M, Rafiq Fahad, Nunez Andrea N, Titto Cristiane Gonçalves, Mateescu Raluca G

机构信息

Department of Animal Science, North Carolina State University, Raleigh, NC, USA.

Department of Animal Sciences, University of Florida, Gainesville, FL, USA.

出版信息

J Anim Sci Biotechnol. 2024 May 8;15(1):66. doi: 10.1186/s40104-024-01025-4.

Abstract

BACKGROUND

Thermal stress in subtropical regions is a major limiting factor in beef cattle production systems with around $369 million being lost annually due to reduced performance. Heat stress causes numerous physiological and behavioral disturbances including reduced feed intake and decreased production levels. Cattle utilize various physiological mechanisms such as sweating to regulate internal heat. Variation in these traits can help identify genetic variants that control sweat gland properties and subsequently allow for genetic selection of cattle with greater thermotolerance.

METHODS

This study used 2,401 Brangus cattle from two commercial ranches in Florida. Precise phenotypes that contribute to an animal's ability to manage heat stress were calculated from skin biopsies and included sweat gland area, sweat gland depth, and sweat gland length. All animals were genotyped with the Bovine GGP F250K, and BLUPF90 software was used to estimate genetic parameters and for Genome Wide Association Study.

RESULTS

Sweat gland phenotypes heritability ranged from 0.17 to 0.42 indicating a moderate amount of the phenotypic variation is due to genetics, allowing producers the ability to select for favorable sweat gland properties. A weighted single-step GWAS using sliding 10 kb windows identified multiple quantitative trait loci (QTLs) explaining a significant amount of genetic variation. QTLs located on BTA7 and BTA12 explained over 1.0% of genetic variance and overlap the ADGRV1 and CCDC168 genes, respectively. The variants identified in this study are implicated in processes related to immune function and cellular proliferation which could be relevant to heat management. Breed of Origin Alleles (BOA) were predicted using local ancestry in admixed populations (LAMP-LD), allowing for identification of markers' origin from either Brahman or Angus ancestry. A BOA GWAS was performed to identify regions inherited from particular ancestral breeds that might have a significant impact on sweat gland phenotypes.

CONCLUSIONS

The results of the BOA GWAS indicate that both Brahman and Angus alleles contribute positively to sweat gland traits, as evidenced by favorable marker effects observed from both genetic backgrounds. Understanding and utilizing genetic traits that confer better heat tolerance is a proactive approach to managing the impacts of climate change on livestock farming.

摘要

背景

亚热带地区的热应激是肉牛生产系统中的一个主要限制因素,每年因性能下降造成的损失约为3.69亿美元。热应激会导致许多生理和行为紊乱,包括采食量减少和生产水平下降。牛利用出汗等各种生理机制来调节体内热量。这些性状的变异有助于识别控制汗腺特性的基因变异,从而实现对耐热性更强的牛进行遗传选择。

方法

本研究使用了来自佛罗里达州两个商业牧场的2401头布兰格斯牛。通过皮肤活检计算出有助于动物管理热应激能力的精确表型,包括汗腺面积、汗腺深度和汗腺长度。所有动物都使用牛GGP F250K进行基因分型,并使用BLUPF90软件估计遗传参数并进行全基因组关联研究。

结果

汗腺表型的遗传力范围为0.17至0.42,表明表型变异中有相当一部分是由遗传因素引起的,这使得生产者能够选择具有良好汗腺特性的牛。使用滑动10 kb窗口的加权单步全基因组关联研究(GWAS)确定了多个解释大量遗传变异的数量性状位点(QTL)。位于牛7号染色体(BTA7)和牛12号染色体(BTA12)上的QTL分别解释了超过1.0%的遗传变异,并且分别与ADGRV1和CCDC168基因重叠。本研究中鉴定出的变异与免疫功能和细胞增殖相关过程有关,这可能与热管理有关。使用混合群体中的本地祖先信息预测起源品种等位基因(BOA),从而能够识别标记来自婆罗门或安格斯血统的起源。进行了BOA GWAS以识别从特定祖先品种遗传而来的可能对汗腺表型有重大影响的区域。

结论

BOA GWAS的结果表明,婆罗门和安格斯等位基因对汗腺性状均有正向贡献,这从两种遗传背景中观察到的有利标记效应得到了证明。了解和利用赋予更好耐热性的遗传性状是应对气候变化对畜牧业影响的一种积极主动的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e0ca/11077762/246aecd13c15/40104_2024_1025_Fig1_HTML.jpg

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