Xu Xun, Pan Xue, Fan Zhaona, Xia Juan, Ren Xianyue
Hospital of Stomatology, Sun Yat-sen University, China; Guangdong Provincial Key Laboratory of Stomatology, Sun Yat-sen University, China; Guanghua School of Stomatology, Sun Yat-sen University, China.
Hospital of Stomatology, Sun Yat-sen University, China; Guangdong Provincial Key Laboratory of Stomatology, Sun Yat-sen University, China; Guanghua School of Stomatology, Sun Yat-sen University, China.
Cell Signal. 2024 Aug;120:111200. doi: 10.1016/j.cellsig.2024.111200. Epub 2024 May 7.
Head and neck squamous cell carcinoma (HNSCC) is one of the most common malignancies. Lactate dehydrogenase family genes (LDHs) play a critical role in tumor metabolism, but their functions in HNSCC have not been investigated thoroughly. Thus, we aimed to explore the value of LDHs in HNSCC.
The association between LDHs expression and mutations, methylation, copy number variations (CNVs), alternative splicing (AS) and competing endogenous RNA (ceRNA) was investigated in The Cancer Genome Atlas (TCGA). The expression level of LDHs in OSCC tissues and adjacent normal tissues was verified by qPCR. Algorithms, such as ssGSEA, ESTIMATE, xCell and TIDE were utilized to analyze the characteristics of immune infiltration. Pathway alternations were enriched by GO, GSEA and KEGG analysis. The Mantel test was employed to elucidate the correlation between metabolism and the tumor microenvironment (TME). Subsequently, MTT and colony formation assays were utilized to assess the impact of LDHB knockdown on cellular proliferation. Additionally, ATP and lactate assays were performed to examine metabolic alterations. Co-culture experiments further investigated the effect of LDHB knockdown on T cell differentiation.
LDHs were completely analyzed in multiple databases, among which LDHB was differentially expressed in HNSCC and significantly associated with prognosis. Low LDHB expression had better clinicopathological characteristics. Downregulated LDHB expression was associated with enhanced immune cell infiltration and could influence tumor metabolism. Despite having worse cytotoxic T lymphocyte dysfunction, the LDHB group was predicted to respond more favorably to immune checkpoint inhibitors (ICIs) therapy. Moreover, the correlation between metabolism and TME was depicted. In vitro, LDHB knockdown resulted in inhibited cell proliferation, increased lactate levels and decreased ATP levels, while promoted the Th1 differentiation of T cells.
Our study provided a comprehensive analysis of the LDHs and illustrated low LDHB expression could inhibit tumor cell proliferation and ATP production by influencing metabolism, with improved immune cell infiltration and better response to immunotherapy.
头颈部鳞状细胞癌(HNSCC)是最常见的恶性肿瘤之一。乳酸脱氢酶家族基因(LDHs)在肿瘤代谢中起关键作用,但其在HNSCC中的功能尚未得到充分研究。因此,我们旨在探讨LDHs在HNSCC中的价值。
在癌症基因组图谱(TCGA)中研究了LDHs表达与突变、甲基化、拷贝数变异(CNV)、可变剪接(AS)和竞争性内源RNA(ceRNA)之间的关联。通过qPCR验证了OSCC组织和癌旁正常组织中LDHs的表达水平。利用ssGSEA、ESTIMATE、xCell和TIDE等算法分析免疫浸润特征。通过GO、GSEA和KEGG分析富集通路变化。采用Mantel检验阐明代谢与肿瘤微环境(TME)之间的相关性。随后,利用MTT和集落形成试验评估LDHB敲低对细胞增殖的影响。此外,进行了ATP和乳酸检测以检查代谢变化。共培养实验进一步研究了LDHB敲低对T细胞分化的影响。
在多个数据库中对LDHs进行了全面分析,其中LDHB在HNSCC中差异表达,且与预后显著相关。低LDHB表达具有更好的临床病理特征。LDHB表达下调与免疫细胞浸润增强相关,并可影响肿瘤代谢。尽管LDHB组的细胞毒性T淋巴细胞功能较差,但预计对免疫检查点抑制剂(ICIs)治疗反应更有利。此外,还描述了代谢与TME之间的相关性。在体外,LDHB敲低导致细胞增殖受抑制、乳酸水平升高和ATP水平降低,同时促进T细胞向Th1分化。
我们的研究对LDHs进行了全面分析,表明低LDHB表达可通过影响代谢抑制肿瘤细胞增殖和ATP产生,同时改善免疫细胞浸润并增强对免疫治疗的反应。