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通过机器学习模型,对成熟人类卵母细胞进行分割,可提供可解释的和改善的胚泡结果预测。

Segmentation of mature human oocytes provides interpretable and improved blastocyst outcome predictions by a machine learning model.

机构信息

Clinical Embryology and Scientific Operations, Future Fertility, 3 Church St, Toronto, ON, M5E 1A9, Canada.

Data Science, Future Fertility, 3 Church St, Toronto, ON, M5E 1A9, Canada.

出版信息

Sci Rep. 2024 May 8;14(1):10569. doi: 10.1038/s41598-024-60901-1.

DOI:10.1038/s41598-024-60901-1
PMID:38719918
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11078996/
Abstract

Within the medical field of human assisted reproductive technology, a method for interpretable, non-invasive, and objective oocyte evaluation is lacking. To address this clinical gap, a workflow utilizing machine learning techniques has been developed involving automatic multi-class segmentation of two-dimensional images, morphometric analysis, and prediction of developmental outcomes of mature denuded oocytes based on feature extraction and clinical variables. Two separate models have been developed for this purpose-a model to perform multiclass segmentation, and a classifier model to classify oocytes as likely or unlikely to develop into a blastocyst (Day 5-7 embryo). The segmentation model is highly accurate at segmenting the oocyte, ensuring high-quality segmented images (masks) are utilized as inputs for the classifier model (mask model). The mask model displayed an area under the curve (AUC) of 0.63, a sensitivity of 0.51, and a specificity of 0.66 on the test set. The AUC underwent a reduction to 0.57 when features extracted from the ooplasm were removed, suggesting the ooplasm holds the information most pertinent to oocyte developmental competence. The mask model was further compared to a deep learning model, which also utilized the segmented images as inputs. The performance of both models combined in an ensemble model was evaluated, showing an improvement (AUC 0.67) compared to either model alone. The results of this study indicate that direct assessments of the oocyte are warranted, providing the first objective insights into key features for developmental competence, a step above the current standard of care-solely utilizing oocyte age as a proxy for quality.

摘要

在人类辅助生殖技术的医学领域,缺乏一种可解释、非侵入性和客观的卵母细胞评估方法。为了解决这一临床空白,开发了一种利用机器学习技术的工作流程,涉及二维图像的自动多类分割、形态计量分析以及基于特征提取和临床变量预测成熟裸卵的发育结果。为此目的开发了两个独立的模型——一个用于执行多类分割的模型,以及一个用于将卵母细胞分类为可能或不可能发育成胚泡(第 5-7 天胚胎)的分类器模型。分割模型在分割卵母细胞方面非常准确,确保高质量的分割图像(掩模)被用作分类器模型(掩模模型)的输入。掩模模型在测试集上的曲线下面积(AUC)为 0.63,灵敏度为 0.51,特异性为 0.66。当从卵质中提取的特征被移除时,AUC 减少到 0.57,这表明卵质包含与卵母细胞发育能力最相关的信息。掩模模型进一步与利用分割图像作为输入的深度学习模型进行了比较。评估了两个模型在集成模型中的联合性能,与单独使用任何一个模型相比都有所提高(AUC 为 0.67)。这项研究的结果表明,有必要直接评估卵母细胞,为评估发育能力的关键特征提供了第一个客观见解,这比当前仅使用卵母细胞年龄作为质量替代物的护理标准更进一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/b7067b7266e5/41598_2024_60901_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/4a5a3be8d3a3/41598_2024_60901_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/b48aad059e96/41598_2024_60901_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/c2e5a751416b/41598_2024_60901_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/df06d0b846bf/41598_2024_60901_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/0761e83664a6/41598_2024_60901_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/b7067b7266e5/41598_2024_60901_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/4a5a3be8d3a3/41598_2024_60901_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/b48aad059e96/41598_2024_60901_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/c2e5a751416b/41598_2024_60901_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/df06d0b846bf/41598_2024_60901_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/0761e83664a6/41598_2024_60901_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8579/11078996/b7067b7266e5/41598_2024_60901_Fig6_HTML.jpg

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