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果蝇中 Su(Hw)-依赖性绝缘子相互作用对转导效应的影响。

Impact of Interactions between Su(Hw)-Dependent Insulators on the Transvection Effect in Drosophila melanogaster.

机构信息

Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.

出版信息

Dokl Biochem Biophys. 2024 Aug;517(1):127-133. doi: 10.1134/S1607672924700820. Epub 2024 May 14.

DOI:10.1134/S1607672924700820
PMID:38744735
Abstract

Transvection is a phenomenon of interallelic communication in which enhancers can activate a specific promoter located on a homologous chromosome. Insulators play a significant role in ensuring functional interactions between enhancers and promoters. In the presented work, we created a model where two or three copies of the insulator are located next to enhancers and promoters localized on homologous chromosomes. Using the Su(Hw) insulator as a model, we showed that the functional interaction between a pair of insulators promotes enhancer-promoter trans-interactions. The interaction between the three insulators, on the contrary, can lead to the formation of chromatin loops that sterically hinder the full enhancer-promoter interaction. The results of the work suggest the participation of insulators in the regulation of homologous chromosome pairing and in communication between distant genomic loci.

摘要

转导是等位基因间通讯的一种现象,其中增强子可以激活位于同源染色体上的特定启动子。绝缘子在确保增强子和启动子之间的功能相互作用方面起着重要作用。在本工作中,我们创建了一个模型,其中两个或三个绝缘子拷贝位于位于同源染色体上的增强子和启动子旁边。使用 Su(Hw)绝缘子作为模型,我们表明一对绝缘子之间的功能相互作用促进了增强子-启动子的转相互作用。相反,三个绝缘子之间的相互作用可能导致染色质环的形成,从而阻碍增强子-启动子的完全相互作用。该工作的结果表明绝缘子参与了同源染色体配对的调控以及远距离基因组位点之间的通讯。

相似文献

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Impact of Interactions between Su(Hw)-Dependent Insulators on the Transvection Effect in Drosophila melanogaster.果蝇中 Su(Hw)-依赖性绝缘子相互作用对转导效应的影响。
Dokl Biochem Biophys. 2024 Aug;517(1):127-133. doi: 10.1134/S1607672924700820. Epub 2024 May 14.
2
Transvection in Drosophila: trans-interaction between yellow enhancers and promoter is strongly suppressed by a cis-promoter only in certain genomic regions.果蝇中的转位作用:黄色增强子与启动子之间的反式相互作用仅在某些基因组区域被顺式启动子强烈抑制。
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Pairing between gypsy insulators facilitates the enhancer action in trans throughout the Drosophila genome.吉普赛绝缘子之间的配对促进了增强子在整个果蝇基因组中的反式作用。
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Interaction between a pair of gypsy insulators or between heterologous gypsy and Wari insulators modulates Flp site-specific recombination in Drosophila melanogaster.一对吉普赛绝缘子之间或异源吉普赛绝缘子与瓦里绝缘子之间的相互作用会调节黑腹果蝇中的Flp位点特异性重组。
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Enhancer-promoter communication is regulated by insulator pairing in a Drosophila model bigenic locus.在果蝇模型双基因座中,增强子与启动子之间的通讯受绝缘子配对调控。
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[Distant interactions between enhancers and promoters in Drosophila melanogaster are mediated by transgene-flanking Su(Hw) insulators].[果蝇中增强子与启动子之间的远距离相互作用由转基因侧翼的Su(Hw)绝缘子介导]
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本文引用的文献

1
The N-Terminal Part of CP190 Is a Platform for Interaction with Multiple Architectural Proteins.CP190 的 N 端部分是与多种结构蛋白相互作用的平台。
Int J Mol Sci. 2023 Nov 2;24(21):15917. doi: 10.3390/ijms242115917.
2
Mechanisms of Interaction between Enhancers and Promoters in Three Model Systems.三种模型系统中增强子与启动子相互作用的机制。
Int J Mol Sci. 2023 Feb 2;24(3):2855. doi: 10.3390/ijms24032855.
3
The spatial organization of transcriptional control.转录调控的空间组织
Nat Rev Genet. 2023 Jan;24(1):53-68. doi: 10.1038/s41576-022-00526-0. Epub 2022 Sep 14.
4
To loop or not to loop: what is the role of TADs in enhancer function and gene regulation?形成环状还是不形成环状:拓扑相关结构域在增强子功能和基因调控中起什么作用?
Curr Opin Genet Dev. 2021 Apr;67:119-129. doi: 10.1016/j.gde.2020.12.015. Epub 2021 Jan 23.
5
Multiple interactions are involved in a highly specific association of the Mod(mdg4)-67.2 isoform with the Su(Hw) sites in .多种相互作用涉及 Mod(mdg4)-67.2 异构体与. 中的 Su(Hw) 位点的高度特异性关联。
Open Biol. 2017 Oct;7(10). doi: 10.1098/rsob.170150.
6
Interactions between BTB domain of CP190 and two adjacent regions in Su(Hw) are required for the insulator complex formation.CP190的BTB结构域与Su(Hw)中两个相邻区域之间的相互作用是绝缘子复合体形成所必需的。
Chromosoma. 2018 Mar;127(1):59-71. doi: 10.1007/s00412-017-0645-6. Epub 2017 Sep 22.
7
Deciphering the DNA code for the function of the Drosophila polydactyl zinc finger protein Suppressor of Hairy-wing.破解果蝇多指锌指蛋白毛翅抑制因子功能的DNA编码。
Nucleic Acids Res. 2017 May 5;45(8):4463-4478. doi: 10.1093/nar/gkx040.
8
The role of the Suppressor of Hairy-wing insulator protein in Drosophila oogenesis.抑制毛翅绝缘子蛋白在果蝇卵子发生中的作用。
Dev Biol. 2011 Aug 15;356(2):398-410. doi: 10.1016/j.ydbio.2011.05.666. Epub 2011 May 30.
9
Active promoters and insulators are marked by the centrosomal protein 190.活跃启动子和绝缘子由中心体蛋白190标记。
EMBO J. 2009 Apr 8;28(7):877-88. doi: 10.1038/emboj.2009.34. Epub 2009 Feb 19.
10
An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases.一种利用生殖系特异性phiC31整合酶的果蝇优化转基因系统。
Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3312-7. doi: 10.1073/pnas.0611511104. Epub 2007 Feb 22.