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苦味受体基因进化、饮食与灵长类动物基因库的关系。

Relationships between Bitter Taste Receptor Gene Evolution, Diet, and Gene Repertoire in Primates.

机构信息

Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education of the People's Republic of China, Guangxi Normal University, Guilin, Guangxi, China.

Guangxi Key Laboratory of Rare and Endangered Animal Ecology, Guangxi Normal University, Guilin, Guangxi, China.

出版信息

Genome Biol Evol. 2024 May 2;16(5). doi: 10.1093/gbe/evae104.

Abstract

Bitter taste perception plays a critical role in deterring animals from consuming harmful and toxic substances. To characterize the evolution of primate Tas2r, test the generality of Tas2r duplication in Cercopithecidae species, and examine whether dietary preferences have shaped the Tas2r repertoire of primate species, we identified Tas2r in the genomes of 35 primate species, including 16 Cercopithecidae, 6 Hominidae, 4 Cebidae, 3 Lemuridae, and 6 other species. The results showed that the total number of primate Tas2r ranged from 27 to 51, concentrating on 2 to 4 scaffolds of each species. Closely related genes were tandemly duplicated in the same scaffold. Phylogenetic construction revealed that Tas2r can be divided into 21 clades, including anthropoid-, Strepsirrhini-, and Cercopithecidae-specific Tas2r duplications. Phylogenetically independent contrast analysis revealed that the number of intact Tas2r significantly correlated with feeding preferences. Altogether, our data support diet as a driver of primate Tas2r evolution, and Cercopithecidae species have developed some specific Tas2r duplication during evolution. These results are probably because most Cercopithecidae species feed on plants containing many toxins, and it is necessary to develop specialized Tas2r to protect them from poisoning.

摘要

苦味感知在阻止动物摄入有害和有毒物质方面起着至关重要的作用。为了描述灵长类 Tas2r 的进化,检验 Tas2r 在卷尾猴科物种中的重复的普遍性,并研究饮食偏好是否塑造了灵长类物种的 Tas2r 库,我们在 35 种灵长类动物的基因组中鉴定了 Tas2r,包括 16 种卷尾猴科、6 种人科、4 种吼猴科、3 种狐猴科和 6 种其他物种。结果表明,灵长类 Tas2r 的总数从 27 到 51 不等,集中在每个物种的 2 到 4 个支架上。密切相关的基因在同一支架上串联重复。系统发育构建表明,Tas2r 可分为 21 个分支,包括类人猿、树鼩和卷尾猴科特异性 Tas2r 重复。系统发育独立对比分析表明,完整的 Tas2r 数量与摄食偏好显著相关。总之,我们的数据支持饮食是灵长类 Tas2r 进化的驱动因素,并且卷尾猴科物种在进化过程中发展了一些特定的 Tas2r 重复。这可能是因为大多数卷尾猴科物种以含有许多毒素的植物为食,需要开发专门的 Tas2r 来保护它们免受中毒。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3502/11135642/1a546da517cd/evae104f1.jpg

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