Xiao Meimei, Ruan Yong, Huang Jiajin, Dai Lingang, Xu Jiali, Xu Houqiang
Key Laboratory of Animal Genetics, Breeding and Reproduction in the Plateau Mountainous Region, Ministry of Education, Guizhou University, Guiyang, China.
Guizhou Provincial Key Laboratory of Animal Genetics, Breeding and Reproduction, Guizhou University, Guiyang, China.
Front Genet. 2024 May 2;15:1346903. doi: 10.3389/fgene.2024.1346903. eCollection 2024.
Acetyl-Coenzyme A Acyltransferase-1 () is a peroxisomal acyltransferase involved in fatty acid metabolism. Current evidence does not precisely reveal the effect of the gene on pig growth performance.
The present study assessed the mRNA expression levels of the gene in the heart, liver, spleen, lung, kidney of 6-month-old Xiangsu pigs and in the longissimus dorsi muscle at different growth stages (newborn, 6 months and 12 months of age) using RT-qPCR. The relationship between single-nucleotide polymorphisms (SNPs) of gene and growth traits in 6-month-old and 12-month-old Xiangsu pigs was investigated on 184 healthy Xiangsu pigs using Sanger sequencing.
The gene was expressed in heart, liver, spleen, lung, kidney, and longissimus dorsi muscle of 6-month-old pigs, with the highest level of expression in the liver. gene expression in the longissimus dorsi muscle decreased with age ( < 0.01). In addition, four SNPs were identified in the gene, including exon g.48810 A>G (rs343060194), intron g.51546 T>C (rs319197012), exon g.55035 T>C (rs333279910), and exon g.55088 C>T (rs322138947). Hardy-Weinberg equilibrium ( > 0.05) was found for the four SNPs, and linkage disequilibrium (LD) analysis revealed a strong LD between g.55035 T>C (rs333279910) and g.55088 C>T (rs322138947) ( = 1.000). Association analysis showed that g.48810 A>G (rs343060194), g.51546 T>C (rs319197012), g.55035 T>C (rs333279910), and g.55088 C>T (rs322138947) varied in body weight, body length, body height, abdominal circumference, leg and hip circumference and living backfat thickness between 6-month-old and 12-month-old Xiangsu pigs.
These findings strongly demonstrate that the gene can be exploited for marker-assisted selection to improve growth-related phenotypes in Xiangsu pigs and present new candidate genes for molecular pig breeding.
乙酰辅酶A酰基转移酶-1()是一种参与脂肪酸代谢的过氧化物酶体酰基转移酶。目前的证据并未确切揭示该基因对猪生长性能的影响。
本研究采用RT-qPCR评估了6月龄香猪心脏、肝脏、脾脏、肺脏、肾脏以及不同生长阶段(新生、6月龄和12月龄)背最长肌中该基因的mRNA表达水平。利用桑格测序法,对184头健康香猪研究了该基因单核苷酸多态性(SNP)与6月龄和12月龄香猪生长性状之间的关系。
该基因在6月龄猪的心脏、肝脏、脾脏、肺脏、肾脏和背最长肌中均有表达,其中在肝脏中的表达水平最高。背最长肌中该基因的表达随年龄增长而降低(<0.01)。此外,在该基因中鉴定出4个SNP,包括外显子g.48810 A>G(rs343060194)、内含子g.51546 T>C(rs319197012)、外显子g.55035 T>C(rs333279910)和外显子g.55088 C>T(rs322138947)。这4个SNP均处于哈迪-温伯格平衡(>0.05),连锁不平衡(LD)分析显示g.55035 T>C(rs333279910)和g.55088 C>T(rs322138947)之间存在强连锁不平衡(=1.000)。关联分析表明,g.48810 A>G(rs343060194)、g.51546 T>C(rs319197012)、g.55035 T>C(rs333279910)和g.55088 C>T(rs322138947)在6月龄和12月龄香猪的体重、体长、体高、腹围、腿围和臀围以及活体背膘厚度方面存在差异。
这些发现有力地证明,该基因可用于标记辅助选择,以改善香猪生长相关表型,并为分子猪育种提供新的候选基因。