College of Ecology and Environment, Ningxia University, Yinchuan 750000, China.
Northwest State Key Laboratory of Land Degradation and Ecological Restoration Incubation Base, Yinchuan 750000, China.
Yi Chuan. 2024 May 20;46(5):360-372. doi: 10.16288/j.yczz.23-292.
In order to understand the progress and frontier in the application of BSA(bulked segregant analysis) method in crop breeding and to reflect objectively the contribution of different countries, institutions and researchers in this field at home and abroad, this study analyzed 2111 items in the WOS (Web of Science) database from 2000 to 2023 and 446 items in the CNKI (China National through Knowledge Infrastructure) database from 2003 to 2023, regarding the researches of the application of BSA in crop breeding, basing on bibliometric analysis methods using CiteSpace software including keyword co-occurrence analysis, highlight word analysis, keyword clustering analysis, clustering timeline analysis and author co-citation. The results showed that there was an consistent increasing trend in the publication number of the application of BSA in crop breeding both in the domestic and foreign journals year by year. Ranking of the top countries according to the number of publications was China, the United States and India. The Huazhong Agricultural University displayed the highest number of publications in the CNKI database, while the Chinese Academy of Agricultural Sciences was found to have the highest number of publications in the WOS database. The published articles related to the application of BSA in crop breeding abroad mainly focused on the disciplines such as plant science, agronomy, horticulture and genetics, while those in China mainly concentrated on such disciplines as plant science, plant protection, horticulture and biology. The top three authors in terms of influence in the field of appling BSA in crop breeding were Michelmore RW, Kosambi DD and Li H, while Michelmore RW, Lander ES and Li H had closer cooperations with other authors. The top three crops relating to the studies of BSA were rice(Oryza sativa), soybean(Glycine max), corn(Zea mays L.) with the hot spot traits of disease resistance and plant height domestically. The top three crops involving the studies of BSA were rice, Arabidopsis thaliana and wheat(Triticum aestivum L.) with hot spot traits of disease resistance abroad. Up to now, BSA was mainly used to localize and functionally verify the candidate genes linking target traits and the mutated genes in crops in the domestical documents, while the foreign published studies based on BSA were mainly focused on the fine mapping and functional verification of target trait genes aiming at the revelation of genetic mechanisms in crops. Research frontier analysis indicated that rice, peanuts(Arachis hypogaea L.), upland cotton(Gossypium hirsutum L.) would be the main objects of studies concerning application of BSA in crop breeding with the hot topics of crop mutants and crop metabolites in the future.
为了了解 BSA( bulked segregant analysis )方法在作物育种中的应用进展和前沿,客观反映国内外不同国家、机构和研究人员在该领域的贡献,本研究基于 CiteSpace 软件的文献计量分析方法,对 2000 年至 2023 年 WOS( Web of Science )数据库中的 2111 项和 2003 年至 2023 年 CNKI (中国国家知识基础设施)数据库中的 446 项应用 BSA 进行作物育种的研究进行了分析。结果表明,国内外期刊中 BSA 在作物育种中的应用论文数量呈逐年持续增长趋势。根据发文数量对前 10 名国家进行排名,中国、美国和印度位列前三。华中农业大学在 CNKI 数据库中的发文量最高,而中国农业科学院在 WOS 数据库中的发文量最高。国外应用 BSA 进行作物育种的相关研究主要集中在植物科学、农学、园艺和遗传学等学科,而中国主要集中在植物科学、植物保护、园艺和生物学等学科。应用 BSA 进行作物育种领域影响力排名前 3 的作者分别是 Michelmore RW 、Kosambi DD 和 Li H ,而 Michelmore RW 、Lander ES 和 Li H 与其他作者的合作更为密切。BSA 研究涉及的前 3 种作物是水稻( Oryza sativa )、大豆( Glycine max )和玉米( Zea mays L. ),国内热点性状是抗病性和株高,前 3 种作物是水稻、拟南芥( Arabidopsis thaliana )和小麦( Triticum aestivum L. ),国外热点性状是抗病性。到目前为止,BSA 主要用于定位和功能验证与目标性状相关的候选基因和作物中的突变基因,而基于 BSA 的国外研究主要集中在目标性状基因的精细定位和功能验证上,旨在揭示作物的遗传机制。研究前沿分析表明,未来水稻、落花生( Arachis hypogaea L. )、陆地棉( Gossypium hirsutum L. )将成为应用 BSA 进行作物育种的主要研究对象,热点话题是作物突变体和作物代谢物。