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亮氨酸脑啡肽质子化肽的光解离:实验与理论视角

Photodissociation of leucine-enkephalin protonated peptide: an experimental and theoretical perspective.

作者信息

Martínez-Fernández Lara, Ranković Miloš Lj, Canon Francis, Nahon Laurent, Giuliani Alexandre, Milosavljević Aleksandar R, Martin-Somer Ana

机构信息

Departamento de Química Física de Materiales, Instituto de Química Física de Materiales, Instituto de Química Física Blas Cabrera, CSIC 28006 Madrid Spain.

Institute of Physics Belgrade, University of Belgrade Pregrevica 118 11080 Belgrade Serbia.

出版信息

RSC Adv. 2024 May 23;14(24):16809-16820. doi: 10.1039/d4ra01690d. eCollection 2024 May 22.

Abstract

Understanding the competing processes that govern far ultraviolet photodissociation (FUV-PD) of biopolymers such as proteins is a challenge. Here, we report a combined experimental and theoretical investigation of FUV-PD of protonated leucine-enkephalin pentapeptide ([YGGFL + H]) in the gas-phase. Time-dependent density functional theory (TD-DFT) calculations in combination with experiments and previous results for amino acids and shorter peptides help in rationalizing the evolution of the excited states. The results confirm that fragmentation of [YGGFL + H] results mainly from vibrationally excited species in the ground electronic state, populated after internal conversion. We also propose fragmentation mechanisms for specific photo-fragments such as tyrosine side chain loss (with an extra hydrogen) or hydrogen loss. In general, we observe the same mechanisms as for smaller peptides or protonated Tyr and Phe, that are not quenched by the presence of other amino acids. Nevertheless, we also found some differences, as for H loss, in part due to the fact that the charge is solvated by the peptide chain and not only by the COOH terminal group.

摘要

理解诸如蛋白质等生物聚合物的远紫外光解离(FUV-PD)的竞争过程是一项挑战。在此,我们报告了气相中质子化亮氨酸脑啡肽五肽([YGGFL + H])的FUV-PD的实验与理论相结合的研究。含时密度泛函理论(TD-DFT)计算结合实验以及先前关于氨基酸和较短肽段的结果,有助于阐明激发态的演化。结果证实,[YGGFL + H]的碎片化主要源于内转换后基态电子态中振动激发的物种。我们还提出了特定光碎片(如酪氨酸侧链损失(带有一个额外氢原子)或氢损失)的碎片化机制。总体而言,我们观察到与较小肽段或质子化酪氨酸和苯丙氨酸相同的机制,这些机制不会因其他氨基酸的存在而淬灭。然而,我们也发现了一些差异,例如氢损失方面,部分原因是电荷不仅由COOH端基溶剂化,还由肽链溶剂化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44a7/11112675/9259c6b8fbf1/d4ra01690d-f1.jpg

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