单分子成像揭示了活细胞中非同源末端连接的动力学。

Single-molecule imaging reveals the kinetics of non-homologous end-joining in living cells.

作者信息

Mikhova Mariia, Goff Noah J, Janovič Tomáš, Heyza Joshua R, Meek Katheryn, Schmidt Jens C

机构信息

Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing.

Institute for Quantitative Health Science and Engineering, Michigan State University, East Lansing.

出版信息

bioRxiv. 2024 May 25:2023.06.22.546088. doi: 10.1101/2023.06.22.546088.

Abstract

Non-homologous end joining (NHEJ) is the predominant pathway that repairs DNA double-stranded breaks (DSBs) in vertebrates. However, due to challenges in detecting DSBs in living cells, the repair capacity of the NHEJ pathway is unknown. The DNA termini of many DSBs must be processed to allow ligation while minimizing genetic changes that result from break repair. Emerging models propose that DNA termini are first synapsed ~115Å apart in one of several long-range synaptic complexes before transitioning into a short-range synaptic complex that juxtaposes DNA ends to facilitate ligation. The transition from long-range to short-range synaptic complexes involves both conformational and compositional changes of the NHEJ factors bound to the DNA break. Importantly, it is unclear how NHEJ proceeds because of the challenges involved in analyzing recruitment of NHEJ factors to DSBs over time in living cells. Here, we develop a new approach to study the temporal and compositional dynamics of NHEJ complexes using live cell single-molecule imaging. Our results provide direct evidence for stepwise maturation of the NHEJ complex, pinpoint key regulatory steps in NHEJ progression, and define the overall repair capacity NHEJ in living cells.

摘要

非同源末端连接(NHEJ)是脊椎动物中修复DNA双链断裂(DSB)的主要途径。然而,由于在活细胞中检测DSB存在挑战,NHEJ途径的修复能力尚不清楚。许多DSB的DNA末端必须经过处理才能进行连接,同时尽量减少断裂修复导致的基因变化。新出现的模型提出,DNA末端首先在几种长距离突触复合物之一中以约115埃的间距形成突触,然后转变为短距离突触复合物,使DNA末端并列以促进连接。从长距离突触复合物到短距离突触复合物的转变涉及与DNA断裂结合的NHEJ因子的构象和组成变化。重要的是,由于在活细胞中随着时间分析NHEJ因子向DSB的募集存在挑战,目前尚不清楚NHEJ是如何进行的。在这里,我们开发了一种新方法,利用活细胞单分子成像来研究NHEJ复合物的时间和组成动态。我们的结果为NHEJ复合物的逐步成熟提供了直接证据,确定了NHEJ进展中的关键调控步骤,并定义了活细胞中NHEJ的整体修复能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54b3/11142080/2a63ce8092b3/nihpp-2023.06.22.546088v2-f0001.jpg

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