Papadimitriou Marios, Ahn Sungwoo, Diamond Benjamin, Lee Holly, McIntyre John, Truger Marietta, Durante Michael, Ziccheddu Bachisio, Landgren Ola, Rasche Leo, Bahlis Nizar J, Neri Paola, Maura Francesco
Myeloma Division, University of Miami, Sylvester Comprehensive Cancer Center, Miami, FL, USA.
Arnie Charbonneau Cancer Institute, University of Calgary, Calgary, Alberta, Canada.
bioRxiv. 2024 May 26:2024.05.22.595383. doi: 10.1101/2024.05.22.595383.
Recent data highlight genomic events driving antigen escape as a recurring cause of chimeric antigen receptor T-cell (CAR-T) and bispecific T-cell engager (TCE) resistance in multiple myeloma (MM). Yet, it remains unclear if these events, leading to clonal dominance at progression, result from acquisition under treatment selection or selection of pre-existing undetectable clones. This differentiation gains importance as these immunotherapies progress to earlier lines of treatment, prompting the need for innovative diagnostic testing to detect these events early on. By reconstructing phylogenetic trees and exploring chemotherapy mutational signatures as temporal barcodes in 11 relapsed refractory MM patients with available whole genome sequencing data before and after CART/TCE treatment, we demonstrated that somatic antigen escape mechanisms for BCMA- and GPRC5D-targeting therapies are acquired post-diagnosis, likely during CART/TCE treatment. Longitudinal tracking of these mutations using digital PCR in 4 patients consistently showed that genomic events promoting antigen escape were not detectable during the initial months of therapy but began to emerge nearly 1 year post therapy initiation. This finding reduces the necessity for a diagnostic panel to identify these events before CART/TCE. Instead, it underscores the importance of surveillance and identifying patients at higher risk of acquiring these events.
近期数据突显了驱动抗原逃逸的基因组事件,这是嵌合抗原受体T细胞(CAR-T)和双特异性T细胞衔接器(TCE)在多发性骨髓瘤(MM)中产生耐药性的一个反复出现的原因。然而,尚不清楚这些导致疾病进展时克隆优势的事件,是在治疗选择下获得的,还是对预先存在的无法检测到的克隆进行选择的结果。随着这些免疫疗法向更早期的治疗线推进,这种区分变得愈发重要,这促使需要创新的诊断测试来尽早检测这些事件。通过重建系统发育树,并将化疗突变特征作为时间条形码,对11例复发难治性MM患者在接受CART/TCE治疗前后的全基因组测序数据进行分析,我们证明,针对BCMA和GPRC5D的疗法的体细胞抗原逃逸机制是在诊断后获得的,可能是在CART/TCE治疗期间。在4例患者中使用数字PCR对这些突变进行纵向追踪,结果一致显示,在治疗的最初几个月内无法检测到促进抗原逃逸的基因组事件,但在治疗开始近1年后开始出现。这一发现降低了在CART/TCE治疗前通过诊断检测来识别这些事件的必要性。相反,它强调了监测以及识别发生这些事件风险较高患者的重要性。