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属名. 新种,一种新型嗜果糖的乳酸菌,来自熊蜂。

gen. nov., sp. nov., a novel fructophilic lactic acid bacterium from bumble bees.

机构信息

Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium.

Innovation Centre for Brewing & Fermentation, Department of Biotechnology, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium.

出版信息

Int J Syst Evol Microbiol. 2024 Jun;74(6). doi: 10.1099/ijsem.0.006409.

Abstract

Strain LMG 33000 was isolated from a gut sample. It shared the highest percentage 16S rRNA sequence identity, average amino acid identity, and amino acid identity of conserved genes with LMG 28291 (95.86 %, 69.9 and 76.2 %, respectively), and the highest percentage OrthoANIu value with DSM 20349 (71.4 %). Phylogenomic analyses by means of 107 or 120 conserved genes consistently revealed as nearest neighbour genus. The draft genome of strain LMG 33000 was 1.44 Mbp in size and had a DNA G+C content of 46.1 mol%. Genomic and physiological analyses revealed that strain LMG 33000 was a typical obligately fructophilic lactic acid bacterium that lacked the and genes and that did not produce ethanol during glucose or fructose metabolism. In contrast, species have the and genes in their genomes and produced ethanol from glucose and fructose metabolism, which is typical for heterofermentative lactic acid bacteria. Moreover, strain LMG 33000 exhibited catalase activity, an unusual characteristic among lactic acid bacteria, that is not shared with species. Given its position in the phylogenomic trees, and the difference in genomic percentage G+C content and in physiological and metabolic characteristics between strain LMG 33000 and species, we considered it most appropriate to classify strain LMG 33000 into a novel genus and species within the family for which we propose the name gen. nov., sp. nov., with LMG 33000 (=CECT 30958) as the type strain.

摘要

LMG 33000 菌株从肠道样本中分离得到。它与 LMG 28291(分别为 95.86%、69.9%和 76.2%)共享最高的 16S rRNA 序列同一性、平均氨基酸同一性和保守基因的氨基酸同一性,与 DSM 20349(71.4%)共享最高的 OrthoANIu 值。通过 107 或 120 个保守基因进行的系统基因组分析一致表明,它是最接近的属。LMG 33000 菌株的基因组草图大小为 1.44 Mbp,GC 含量为 46.1 mol%。基因组和生理分析表明,LMG 33000 是一种典型的专性果糖嗜酸性乳酸菌,缺乏和基因,并且在葡萄糖或果糖代谢过程中不产生乙醇。相比之下,种属在其基因组中具有和基因,并从葡萄糖和果糖代谢中产生乙醇,这是异型发酵乳酸菌的典型特征。此外,LMG 33000 表现出过氧化氢酶活性,这是一种在乳酸菌中不常见的特征,与种属不同。鉴于其在系统基因组树中的位置,以及 LMG 33000 菌株与种属在基因组 GC 含量百分比和生理及代谢特征方面的差异,我们认为将 LMG 33000 菌株分类为一个新属和种属是最合适的,该属属于乳杆菌科,我们提议将其命名为属,新种,LMG 33000(= CECT 30958)为模式菌株。

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