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杂种的释放:探索病原性酵母杂种的出现和基因组见解。

Hybrids unleashed: exploring the emergence and genomic insights of pathogenic yeast hybrids.

机构信息

Life Sciences Department, Barcelona Supercomputing Center (BSC), Jordi Girona, 29, 08034 Barcelona, Spain; Mechanisms of Disease Program, Institute for Research in Biomedicine (IRB), The Barcelona Institute of Science and Technology, Barcelona, Spain.

Life Sciences Department, Barcelona Supercomputing Center (BSC), Jordi Girona, 29, 08034 Barcelona, Spain; Mechanisms of Disease Program, Institute for Research in Biomedicine (IRB), The Barcelona Institute of Science and Technology, Barcelona, Spain; ICREA, Pg. Lluis Companys 23, Barcelona 08010, Spain; Centro de Investigación Biomédica En Red de Enfermedades Infecciosas, Barcelona, Spain.

出版信息

Curr Opin Microbiol. 2024 Aug;80:102491. doi: 10.1016/j.mib.2024.102491. Epub 2024 Jun 3.

DOI:10.1016/j.mib.2024.102491
PMID:38833792
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11358589/
Abstract

Hybridisation is the crossing of two divergent lineages that give rise to offspring carrying an admixture of both parental genomes. Genome sequencing has revealed that this process is common in the Saccharomycotina, where a growing number of hybrid strains or species, including many pathogenic ones, have been recently described. Hybrids can display unique traits that may drive adaptation to new niches, and some pathogenic hybrids have been shown to have higher prevalence over their parents in human and environmental niches, suggesting a higher fitness and potential to colonise humans. Here, we discuss how hybridisation and its genomic and phenotypic outcomes can shape the evolution of fungal species and may play a role in the emergence of new pathogens.

摘要

杂交是指两个不同谱系的交叉,产生携带双亲基因组混合物的后代。基因组测序表明,这种过程在 Saccharomycotina 中很常见,最近描述了越来越多的杂交菌株或物种,包括许多病原体。杂种可以表现出独特的特征,这些特征可能有助于适应新的生态位,一些病原体杂种在人类和环境生态位中的流行程度高于其亲本,这表明它们具有更高的适应性和在人类中定植的潜力。在这里,我们讨论了杂交及其基因组和表型结果如何塑造真菌物种的进化,并可能在新病原体的出现中发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5b1/11358589/08a34831ace7/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5b1/11358589/87c67fb638eb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5b1/11358589/08a34831ace7/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5b1/11358589/87c67fb638eb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5b1/11358589/08a34831ace7/gr2.jpg

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本文引用的文献

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Global incidence and mortality of severe fungal disease.全球严重真菌感染的发病率和死亡率。
Lancet Infect Dis. 2024 Jul;24(7):e428-e438. doi: 10.1016/S1473-3099(23)00692-8. Epub 2024 Jan 12.
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JLOH: Inferring loss of heterozygosity blocks from sequencing data.《人类遗传学杂志》:从测序数据推断杂合性缺失区域。
Comput Struct Biotechnol J. 2023 Nov 7;21:5738-5750. doi: 10.1016/j.csbj.2023.11.003. eCollection 2023.
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Global warming could drive the emergence of new fungal pathogens.全球变暖可能促使新的真菌病原体出现。
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Origin of fungal hybrids with pathogenic potential from warm seawater environments.具有潜在致病性的真菌杂种的起源来自温暖的海水环境。
Nat Commun. 2023 Oct 30;14(1):6919. doi: 10.1038/s41467-023-42679-4.
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Loss of Heterozygosity and Its Importance in Evolution.杂合性丢失及其在进化中的重要性。
J Mol Evol. 2023 Jun;91(3):369-377. doi: 10.1007/s00239-022-10088-8. Epub 2023 Feb 8.
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Karyon: a computational framework for the diagnosis of hybrids, aneuploids, and other nonstandard architectures in genome assemblies.卡戎:一个用于基因组组装中杂种、非整倍体和其他非标准结构的诊断的计算框架。
Gigascience. 2022 Oct 7;11. doi: 10.1093/gigascience/giac088.
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Evolution of the human pathogenic lifestyle in fungi.真菌中人类致病生活方式的演变。
Nat Microbiol. 2022 May;7(5):607-619. doi: 10.1038/s41564-022-01112-0. Epub 2022 May 4.
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