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第二配位球和远程区域的临床突变对非血红素 Fe(II)/2-氧代戊二酸依赖性天冬氨酸羟化酶 AspH 催化机制的影响。

Effects of Clinical Mutations in the Second Coordination Sphere and Remote Regions on the Catalytic Mechanism of Non-Heme Fe(II)/2-Oxoglutarate-Dependent Aspartyl Hydroxylase AspH.

机构信息

Department of Chemistry, Michigan Technological University, Houghton, MI-49931, USA.

Department of Chemical Engineering, Michigan Techno, Department of Chemistry, Michigan Technological University, Houghton, MI-49931, USA.

出版信息

Chemphyschem. 2024 Sep 16;25(18):e202400303. doi: 10.1002/cphc.202400303. Epub 2024 Jul 30.

DOI:10.1002/cphc.202400303
PMID:38839574
Abstract

Aspartyl/asparaginyl hydroxylase (AspH) catalyzes the post-translational hydroxylations of vital human proteins, playing an essential role in maintaining their biological functions. Single-point mutations in the Second Coordination Sphere (SCS) and long-range (LR) residues of AspH have been linked to pathological conditions such as the ophthalmologic condition Traboulsi syndrome and chronic kidney disease (CKD). Although the clinical impacts of these mutations are established, there is a critical knowledge gap regarding their specific atomistic effects on the catalytic mechanism of AspH. In this study, we report integrated computational investigations on the potential mechanistic implications of four mutant forms of human AspH with clinical importance: R735W, R735Q, R688Q, and G434V. All the mutant forms exhibited altered binding interactions with the co-substrate 2-oxoglutarate (2OG) and the main substrate in the ferric-superoxo and ferryl complexes, which are critical for catalysis, compared to the wild-type (WT). Importantly, the mutations strongly influence the energetics of the frontier molecular orbitals (FMOs) and, thereby, the activation energies for the hydrogen atom transfer (HAT) step compared to the WT AspH. Insights from our study can contribute to enzyme engineering and the development of selective modulators for WT and mutants of AspH, ultimately aiding in treating cancers, Traboulsi syndrome and, CKD.

摘要

天冬氨酰/asparaginyl 羟化酶 (AspH) 催化重要人类蛋白的翻译后羟基化,在维持其生物功能方面发挥着重要作用。AspH 的第二配位球(SCS)和远程(LR)残基中的单点突变与眼部疾病 Traboulsi 综合征和慢性肾脏病(CKD)等病理状况有关。尽管这些突变的临床影响已经确定,但对于它们对 AspH 催化机制的具体原子影响,仍存在关键的知识空白。在这项研究中,我们报告了对具有临床重要性的四种人源 AspH 突变体形式的综合计算研究结果:R735W、R735Q、R688Q 和 G434V。与野生型(WT)相比,所有突变体形式都表现出与共底物 2-氧戊二酸(2OG)和铁-超氧和铁氧复合物中主要底物的结合相互作用发生改变,这对于催化至关重要。重要的是,与 WT AspH 相比,这些突变强烈影响前线分子轨道(FMO)的能量,从而影响氢原子转移(HAT)步骤的活化能。我们研究的见解可以为酶工程和 WT 及 AspH 突变体的选择性调节剂的开发做出贡献,最终有助于治疗癌症、Traboulsi 综合征和 CKD。

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