Institute of Life and Environmental Sciences, Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA), University of Tsukuba, Tennoudai 1-1-1, Tsukuba, Ibaraki, 305-8577, Japan.
Graduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Epigenetics Chromatin. 2024 Jun 5;17(1):20. doi: 10.1186/s13072-024-00544-8.
Paternal allele-specific DNA methylation of the imprinting control region (H19 ICR) controls genomic imprinting at the Igf2/H19 locus. We previously demonstrated that the mouse H19 ICR transgene acquires imprinted DNA methylation in preimplantation mouse embryos. This activity is also present in the endogenous H19 ICR and protects it from genome-wide reprogramming after fertilization. We also identified a 118-bp sequence within the H19 ICR that is responsible for post-fertilization imprinted methylation. Two mutations, one in the five RCTG motifs and the other a 36-bp deletion both in the 118-bp segment, caused complete and partial loss, respectively, of methylation following paternal transmission in each transgenic mouse. Interestingly, these mutations overlap with the binding site for the transcription factor Kaiso, which is reportedly involved in maintaining paternal methylation at the human H19 ICR (IC1) in cultured cells. In this study, we investigated if Kaiso regulates imprinted DNA methylation of the H19 ICR in vivo.
Neither Kaiso deletion nor mutation of Kaiso binding sites in the 118-bp region affected DNA methylation of the mouse H19 ICR transgene. The endogenous mouse H19 ICR was methylated in a wild-type manner in Kaiso-null mutant mice. Additionally, the human IC1 transgene acquired imprinted DNA methylation after fertilization in the absence of Kaiso.
Our results indicate that Kaiso is not essential for either post-fertilization imprinted DNA methylation of the transgenic H19 ICR in mouse or for methylation imprinting of the endogenous mouse H19 ICR.
印迹控制区(H19 ICR)的父源等位基因特异性 DNA 甲基化控制着 Igf2/H19 基因座的基因组印迹。我们之前证明,小鼠 H19 ICR 转基因在着床前小鼠胚胎中获得印迹 DNA 甲基化。这种活性也存在于内源性 H19 ICR 中,并保护其免受受精后全基因组重编程的影响。我们还鉴定出 H19 ICR 内负责受精后印迹甲基化的 118bp 序列。两个突变,一个在五个 RCTG 基序中,另一个在 118bp 片段中有 36bp 的缺失,分别导致每个转基因小鼠中父系传递后甲基化的完全和部分丢失。有趣的是,这些突变与转录因子 Kaiso 的结合位点重叠,据报道 Kaiso 参与维持培养细胞中人 H19 ICR(IC1)中的父系甲基化。在这项研究中,我们研究了 Kaiso 是否在体内调节 H19 ICR 的印迹 DNA 甲基化。
Kaiso 缺失或 118bp 区域 Kaiso 结合位点的突变均不影响小鼠 H19 ICR 转基因的 DNA 甲基化。在 Kaiso 缺失突变小鼠中,内源性小鼠 H19 ICR 以野生型方式甲基化。此外,在没有 Kaiso 的情况下,人 IC1 转基因在受精后获得印迹 DNA 甲基化。
我们的结果表明,Kaiso 对于小鼠中转基因 H19 ICR 的受精后印迹 DNA 甲基化或内源性小鼠 H19 ICR 的甲基化印迹都不是必需的。