The objective of this study was to compare the effectiveness of both small-sided games (SSG) and short interval running-based high-intensity interval training (HIIT) programs over an 8-week period in fostering adaptations in aerobic capacity, change-of-direction abilities, and jumping performances of youth female soccer players. The study involved 48 female youth participants under the age of 19, competing at the regional level, who took part in a randomized controlled trial. Participants were assigned to either the SSG group, the HIIT group, or a control group, which involved regular in-field sessions. Assessments were conducted at baseline and after the 8-week training intervention, measuring aerobic capacity using the 30-15 intermittent fitness test (VIFT), change of direction (COD) using the 5-0-5 test, and jumping performance using the countermovement jump test (CMJ). Time 5 group analysis revealed significant interactions in CMJ ( = 0.005; = 0.213) and VIFT ( < 0.001; = 0.433), although no significant interaction were found in COD deficit ( = 0.246; = 0.060). Within-group analysis revealed that SSG significantly improved CMJ ( < 0.001), COD deficit ( < 0.001), and VIFT ( < 0.001). HIIT group also significantly improved CMJ ( = 0.029), COD deficit ( = 0.001), and VIFT ( < 0.001). As conclusion, the study revealed that SSG promoted significantly improvements in VIFT, CMJ and COD deficit, being significantly better than control group, while HIIT was only significantly better than control in VIFT. SSG revealed to be effective approach for favoring key physical attributes of female soccer players, being an interesting and recommended training approach to increase the ecology of the training practice, while favoring physical positive adaptations.