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人肾素三维结构模型的构建。

Construction of a model for the three-dimensional structure of human renal renin.

作者信息

Carlson W, Karplus M, Haber E

出版信息

Hypertension. 1985 Jan-Feb;7(1):13-26. doi: 10.1161/01.hyp.7.1.13.

Abstract

The aspartyl proteases that have had their complete three-dimensional structures determined by x-ray diffraction techniques exhibit a high degree of structural homology and a correspondingly high degree of sequence homology. Using this homology, we constructed a model for the three-dimensional structure of human renal renin. We then refined and evaluated the model with the energy refinement program called CHARMM. We found that the model for human renin differs from that of mouse submaxillary gland renin in certain features, which may account for the differences in substrate specificity and antibody binding. Amino acid differences between human and mouse renin in the regions that bind the P1' side chain of the substrate appear to change only the shape of the S1' subsite of the enzyme, so that either valine or leucine side chains of the substrate can be accommodated by human renin. Amino acids in the solvent-accessible surface of the 75-85 flap appear to be distinctly different between the two structures and could account for the differences observed in antibody binding to human and mouse renin.

摘要

通过X射线衍射技术确定了完整三维结构的天冬氨酸蛋白酶表现出高度的结构同源性以及相应程度的序列同源性。利用这种同源性,我们构建了人肾素三维结构的模型。然后我们使用名为CHARMM的能量优化程序对该模型进行了优化和评估。我们发现人肾素的模型在某些特征上与小鼠颌下腺肾素的模型不同,这可能解释了底物特异性和抗体结合方面的差异。人肾素和小鼠肾素在结合底物P1'侧链的区域中的氨基酸差异似乎仅改变了酶的S1'亚位点的形状,因此人肾素可以容纳底物的缬氨酸或亮氨酸侧链。在两种结构中,75 - 85侧翼溶剂可及表面的氨基酸明显不同,这可以解释在人肾素和小鼠肾素抗体结合中观察到的差异。

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