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人肾素的三维结构

Three-dimensional structure of human renin.

作者信息

Akahane K, Umeyama H, Nakagawa S, Moriguchi I, Hirose S, Iizuka K, Murakami K

出版信息

Hypertension. 1985 Jan-Feb;7(1):3-12. doi: 10.1161/01.hyp.7.1.3.

Abstract

A three-dimensional model of human renin has been constructed based on the assumption that the overall folding of the aspartyl proteases is very similar. As a reference, we used penicillopepsin, the structure of which has been reported at a resolution of 1.8 A, and its main chain was traced to build a model of renin. The resulting structure seems to be stable from the hydrophobic and hydrophilic viewpoints. Comparison of the tertiary structure of human renin with that of penicillopepsin and mouse renin suggests the existence of a high structural homology as well as differences in the molecular geometry of the active sites that may influence the substrate specificity. The asparagine side chains in the glycosidation signal of Asn-X-Thr are exposed on the surface. Moreover, the site in human renin that corresponds to the proteolytic cleavage site in mouse renin also appears to be exposed on the surface so as to be easily scissored during the maturation process. The insertions and deletions of amino acid residues were found to arise on the surface, and in some places they occurred in complementary manners. Models of molecular complexes between human renin and renin inhibitor were constructed to understand the interacting modes that indicate how new renin inhibitors develop. Inhibitor-binding sites were directly assigned based on the models of the inhibitor-enzyme complex.

摘要

基于天冬氨酸蛋白酶的整体折叠非常相似这一假设,构建了人肾素的三维模型。作为参考,我们使用了青霉胃蛋白酶,其结构已在1.8埃的分辨率下报道,我们追踪其主链来构建肾素模型。从疏水和亲水的角度来看,所得结构似乎是稳定的。将人肾素的三级结构与青霉胃蛋白酶和小鼠肾素的三级结构进行比较,结果表明它们不仅存在高度的结构同源性,而且活性位点的分子几何形状也存在差异,这可能会影响底物特异性。天冬酰胺-X-苏氨酸糖基化信号中的天冬酰胺侧链暴露在表面。此外,人肾素中与小鼠肾素蛋白水解切割位点相对应的位点似乎也暴露在表面,以便在成熟过程中易于被剪切。发现氨基酸残基的插入和缺失出现在表面,并且在某些地方它们以互补的方式发生。构建了人肾素与肾素抑制剂之间的分子复合物模型,以了解相互作用模式,这有助于指明新型肾素抑制剂的研发方向。基于抑制剂-酶复合物模型直接确定了抑制剂结合位点。

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