El Atrassi Zakaria, Zouhair Mustapha, Blacque Olivier, Hökelek Tuncer, Haoudi Amal, Mazzah Ahmed, Cherkaoui Hassan, Sebbar Nada Kheira
Laboratory of Heterocyclic Organic Chemistry, Medicines Science Research Center, Pharmacochemistry Competence Center, Mohammed V University in Rabat, Faculté des Sciences, Av. Ibn Battouta, BP 1014, Rabat, Morocco.
University of Zurich, Department of Chemistry, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland.
Acta Crystallogr E Crystallogr Commun. 2024 May 14;80(Pt 6):601-606. doi: 10.1107/S2056989024004043. eCollection 2024 May 1.
The benzimidazole entity of the title mol-ecule, CHNO, is almost planar (r.m.s. deviation = 0.0262 Å). In the crystal, bifurcated C-H⋯O hydrogen bonds link individual mol-ecules into layers extending parallel to the plane. Two weak C-H⋯π(ring) inter-actions may also be effective in the stabilization of the crystal structure. Hirshfeld surface analysis of the crystal structure reveals that the most important contributions for the crystal packing are from H⋯H (57.9%), H⋯C/C⋯H (18.1%) and H⋯O/O⋯H (14.9%) inter-actions. Hydrogen bonding and van der Waals inter-actions are the most dominant forces in the crystal packing. Evaluation of the electrostatic, dispersion and total energy frameworks indicate that the stabilization of the title compound is dominated dispersion energy contributions. The mol-ecular structure optimized by density functional theory (DFT) at the B3LYP/6-311 G(d,p) level is compared with the experimentally determined mol-ecular structure in the solid state.
标题分子CHNO的苯并咪唑实体几乎是平面的(均方根偏差 = 0.0262 Å)。在晶体中,分叉的C-H⋯O氢键将单个分子连接成平行于平面延伸的层。两个弱的C-H⋯π(环)相互作用在晶体结构的稳定中也可能起作用。晶体结构的 Hirshfeld 表面分析表明,对晶体堆积最重要的贡献来自H⋯H(57.9%)、H⋯C/C⋯H(18.1%)和H⋯O/O⋯H(14.9%)相互作用。氢键和范德华相互作用是晶体堆积中最主要的作用力。对静电、色散和总能量框架的评估表明,标题化合物的稳定性主要由色散能贡献主导。将在B3LYP/6-311 G(d,p)水平上通过密度泛函理论(DFT)优化的分子结构与固态下实验测定的分子结构进行了比较。