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靶向 CD47 和 PD-L1 的轻链驱动双特异性抗体的结构分析。

Structural analysis of light chain-driven bispecific antibodies targeting CD47 and PD-L1.

机构信息

Light Chain Bioscience - Novimmune SA, Plan-les-Ouates, Switzerland.

SARomics Biostructures AB, Lund, Sweden.

出版信息

MAbs. 2024 Jan-Dec;16(1):2362432. doi: 10.1080/19420862.2024.2362432. Epub 2024 Jun 7.

Abstract

In contrast to natural antibodies that rely mainly on the heavy chain to establish contacts with their cognate antigen, we have developed a bispecific antibody format in which the light chain (LC) drives antigen binding and specificity. To better understand epitope-paratope interactions in this context, we determined the X-ray crystallographic structures of an antigen binding fragment (Fab) in complex with human CD47 and another Fab in complex with human PD-L1. These Fabs contain a κ-LC and a λ-LC, respectively, which are paired with an identical heavy chain (HC). The structural analysis of these complexes revealed the dominant contribution of the LCs to antigen binding, but also that the common HC provides some contacts in both CD47 and PD-L1 Fab complexes. The anti-CD47 Fab was affinity optimized by diversifying complementary-determining regions of the LC followed by phage display selections. Using homology modeling, the contributions of the amino acid modification to the affinity increase were analyzed. Our results demonstrate that, despite a less prominent role in natural antibodies, the LC can mediate high affinity binding to different antigens and neutralize their biological function. Importantly, Fabs containing a common variable heavy (VH) domain enable the generation of bispecific antibodies retaining a truly native structure, maximizing their therapeutic potential.

摘要

与主要依赖重链与相应抗原建立联系的天然抗体不同,我们开发了一种双特异性抗体形式,其中轻链(LC)驱动抗原结合和特异性。为了更好地理解这种情况下的表位-抗体互补决定区相互作用,我们确定了与人类 CD47 结合的抗原结合片段(Fab)和与人类 PD-L1 结合的另一个 Fab 的 X 射线晶体结构。这些 Fab 分别包含 κ-LC 和 λ-LC,它们与相同的重链(HC)配对。这些复合物的结构分析表明,LC 对抗原结合的贡献占主导地位,但共同的 HC 也在 CD47 和 PD-L1 Fab 复合物中提供了一些接触。通过对 LC 的互补决定区进行多样化,然后进行噬菌体展示选择,对抗 CD47 Fab 进行了亲和力优化。使用同源建模分析了氨基酸修饰对亲和力增加的贡献。我们的结果表明,尽管在天然抗体中的作用不那么突出,但 LC 可以介导与不同抗原的高亲和力结合,并中和它们的生物学功能。重要的是,含有共同可变重链(VH)结构域的 Fab 能够产生保留真正天然结构的双特异性抗体,最大限度地发挥其治疗潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a92/11164222/d5844a774ecb/KMAB_A_2362432_F0001_OC.jpg

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