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鉴定羟固醇脱氢酶 1 为潜在的膀胱癌标志物。

Identification of Hydroxysteroid Dehydrogenase Type 1 As a Potential Bladder Tumor Marker.

机构信息

State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China.

Qinghai Key Laboratory of Qinghai-Tibet Plateau Biological Resources, Northwest Institute of Plateau Biology, The Chinese Academy of Sciences, Xining 810001, China.

出版信息

Iran Biomed J. 2024 Mar 1;28(2&3):120-31. doi: 10.61186/ibj.4068.

Abstract

BACKGROUND

The 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B) family has been implicated in the prognosis and treatment prediction of various malignancies; however, its association with bladder cancer (BLCA) remains unclear. This study aimed to evaluate the potential of HSD17B1, as a prognostic biomarker, for the survival of patients with BLCA and to determine its effectiveness as a supplemental biomarker for BLCA.

METHODS

A series of bioinformatics techniques were applied to investigate the expression of HSD17B1 in different types of cancer and its potential association with the prognosis of BLCA patients using diverse databases. The UALCAN, Human Protein Atlas, cBioPortal, Metascape, GEPIA, MethSurv, and TIMER were employed to analyze expression differences, mutation status, enrichment analysis, overall survival, methylation, and immune-infiltrating cells. The real-time reverse transcription-PCR (qRT-PCR) was implemented to detect the messenger ribonucleic acid (mRNA) expression levels of HSD17B1 in vitro.

RESULTS

Elevated mRNA and protein levels of HSD17B1, surpassing normal levels, were observed in BLCA samples. In addition, the BLCA patients with higher mRNA expression level of HSD17B1 significantly reduced the overall survival. Also, several immune infiltrating cells, including mast cell resting CIBERSORT-ABS, have been identified as tumor-associated biomarker genes, with the potential to significantly influence the immunological environment. Finally, qRT-PCR analysis revealed a significant upregulation of HSD17B1 mRNA expression level in the cancer cells compared to the human 293T cells, which was consistent with the bioinformatics data.

CONCLUSION

There is a strong correlation between the elevated HSD17B1 expression and positive prognosis in patients with BLCA. Therefore, HSD17B1 can be used as a prognostic biomarker in these patients.

摘要

背景

17β-羟甾类脱氢酶 1 型(HSD17B)家族与各种恶性肿瘤的预后和治疗预测有关;然而,其与膀胱癌(BLCA)的关系尚不清楚。本研究旨在评估 HSD17B1 作为预后生物标志物对 BLCA 患者生存的潜在作用,并确定其作为 BLCA 辅助生物标志物的有效性。

方法

应用一系列生物信息学技术,利用多个数据库研究 HSD17B1 在不同类型癌症中的表达及其与 BLCA 患者预后的潜在关联。使用 UALCAN、Human Protein Atlas、cBioPortal、Metascape、GEPIA、MethSurv 和 TIMER 分析差异表达、突变状态、富集分析、总生存期、甲基化和免疫细胞浸润。采用实时逆转录-PCR(qRT-PCR)检测 HSD17B1 在体外的信使核糖核酸(mRNA)表达水平。

结果

BLCA 样本中观察到 HSD17B1 的 mRNA 和蛋白水平升高,超过正常水平。此外,HSD17B1 mRNA 表达水平较高的 BLCA 患者总生存期明显缩短。此外,包括静止肥大细胞在内的几种免疫浸润细胞已被确定为肿瘤相关生物标志物基因,它们具有显著影响免疫环境的潜力。最后,qRT-PCR 分析显示与人类 293T 细胞相比,癌细胞中 HSD17B1 mRNA 表达水平显著上调,与生物信息学数据一致。

结论

BLCA 患者中 HSD17B1 表达升高与阳性预后密切相关。因此,HSD17B1 可作为这些患者的预后生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a135/11186615/006b9af2331d/ibj-28-120-g001.jpg

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