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评估微生物湿真空系统(M-Vac®)用于从粗糙多孔基质中采样 DNA,以及其与全自动平台的兼容性。

Evaluation of the microbial wet-vacuum system (M-Vac®) for DNA sampling from rough, porous substrates, and its compatibility with fully automated platforms.

机构信息

NSW Police Force, Forensic Evidence & Technical Services Command, Australia; Centre for Forensic Science, University of Technology Sydney, Australia.

NSW Police Force, Forensic Evidence & Technical Services Command, Australia.

出版信息

Forensic Sci Int. 2024 Aug;361:112079. doi: 10.1016/j.forsciint.2024.112079. Epub 2024 May 29.

Abstract

DNA retrieval methods traditionally used during forensic evidence recovery including swabbing and tape lifting, can have limited effectiveness when used on porous, rough substrates such as bricks and carpet. This is possibly due to the DNA material being dispersed and unreachable for surface sampling techniques. In this evaluation we investigated the effectiveness of the Microbial Wet-Vacuum System (M-Vac®; M-Vac® Systems, Inc., Sandy, UT), as it has been reported to retrieve greater amounts of DNA material from challenging exhibits. A four-stage evaluation was conducted, starting with seeding carpet and brick substrates with a known donor's saliva in two dilutions and comparing the DNA recovery of tape lifting, swabbing, and the M-Vac®. A victim struggle scenario on carpet was then mimicked to compare trace DNA recovery by each method. Two mock scenarios were also conducted; a shirt was submerged in a creek bed for a period of five days to sample for the wearer's DNA, and a car boot was sampled to assess the possibility of recovering a victim's DNA amongst background DNA from the usual car occupants. Finally, the compatibility of the M-Vac® sampling process was optimised for the fully automated DNA lysis and extraction platforms used in the NSW (Australia) jurisdiction by comparing filter subsampling methods. The results from the study were mixed. For bricks, none of the collection methods were effective in retrieving DNA. On carpet, the M-Vac® retrieved the greatest quantities of DNA from the saliva-seeded samples, however, tape lifts outperformed all methods for 'touch' DNA recovery. The M-Vac® retrieved the greatest amount of DNA from the t-shirt recovered from a creek bed as it was able to retrieve the embedded DNA. The final mock case car boot scenario resulted in greater victim DNA recovery from tape lifts, with the M-Vac® more likely to recover mixtures too weak and/or complex to be interpreted. Finally, operational considerations regarding the compatibility of the M-Vac® system with fully automated DNA lysis and extraction are discussed. Considering the substantial time and cost to deploy the M-Vac®, it is recommended to be utilised in casework only after swabbing and tape lifting methods have failed to yield sufficient DNA material, where the substrate properties would likely benefit from the M-Vac's® niche capabilities for retrieving embedded DNA, and low levels of background DNA may be anticipated.

摘要

传统上用于法医证据恢复的 DNA 提取方法,包括擦拭和胶带提取,在处理多孔、粗糙的基质(如砖块和地毯)时效果可能有限。这可能是由于 DNA 材料分散且无法通过表面采样技术获取。在这项评估中,我们研究了微生物湿真空系统(M-Vac®;M-Vac® Systems,Inc.,Sandy,UT)的有效性,因为据报道它可以从具有挑战性的展品中提取更多的 DNA 材料。我们进行了四个阶段的评估,首先在两种稀释度下用已知供体的唾液对地毯和砖块基质进行播种,并比较胶带提取、擦拭和 M-Vac®的 DNA 回收情况。然后模拟了在地毯上的受害者挣扎场景,以比较每种方法的痕量 DNA 回收情况。还进行了两个模拟场景;一件衬衫在溪流床中浸泡了五天,以采样衬衫穿着者的 DNA;并对汽车后备箱进行采样,以评估在通常的汽车乘客的背景 DNA 中是否有可能提取到受害者的 DNA。最后,通过比较过滤子采样方法,优化了 M-Vac®采样过程与新南威尔士州(澳大利亚)司法管辖区使用的全自动 DNA 裂解和提取平台的兼容性。研究结果喜忧参半。对于砖块,没有一种收集方法能有效地从 DNA 中提取。在地毯上,M-Vac®从唾液播种的样本中提取了最多的 DNA,但胶带提取在“触摸”DNA 回收方面优于所有方法。M-Vac®从从溪流床中回收的 T 恤中提取了最多的 DNA,因为它能够提取嵌入的 DNA。最后一个模拟案例汽车后备箱场景导致从胶带提取中提取到更多的受害者 DNA,而 M-Vac®更有可能提取到太弱和/或复杂而无法解释的混合物。最后,讨论了与全自动 DNA 裂解和提取兼容的 M-Vac®系统的操作注意事项。考虑到部署 M-Vac®的大量时间和成本,建议仅在擦拭和胶带提取方法未能产生足够的 DNA 材料时在案件中使用,并且基质特性可能受益于 M-Vac®从嵌入 DNA 中提取的利基能力,并且可以预期背景 DNA 水平较低。

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