Fukuura Shuta, Nishidate Yohei, Yumura Takashi
Faculty of Materials Science and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
Materials Innovation Lab, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
J Phys Chem A. 2024 Jun 27;128(25):5054-5064. doi: 10.1021/acs.jpca.4c01685. Epub 2024 Jun 13.
Particle swarm optimization (PSO) was employed to obtain the global minimum of host-guest structures consisting of a triiodobenzene molecule (BzI) inside an armchair (,) nanotube (BzI@(,)), whose host-guest interactions are approximated by Lennard-Jones (LJ) potentials. The host-guest structures obtained using the PSO-LJ method were then compared with those obtained through dispersion-corrected density functional theory (DFT) calculations to evaluate the performance of the PSO-LJ approach in predicting the guest orientation inside a tube. When the inner space of the host tube is limited for guest encapsulation, the PSO-LJ method can reproduce the DFT results of BzI@(,) in terms of the guest orientation. Conversely, in nanotubes with a sufficiently large space to allow a guest to freely move, corresponding to weak tube confinement, the PSO-LJ method yields guest orientations that are different from those obtained through DFT calculations; however, both methods obtain energetically close guest orientations. Accordingly, PSO-LJ method-assisted DFT calculations can quickly provide energetically stable guest orientations in BzI@(,) in weak tube confinement, which can be ignored in DFT calculations, where a single initial geometry is typically used.
采用粒子群优化算法(PSO)来获取由扶手椅型(,)纳米管(BzI@(,))内的三碘苯分子(BzI)组成的主客体结构的全局最小值,其主客体相互作用通过 Lennard-Jones(LJ)势近似。然后将使用 PSO-LJ 方法获得的主客体结构与通过色散校正密度泛函理论(DFT)计算得到的结构进行比较,以评估 PSO-LJ 方法在预测管内客体取向方面的性能。当主体管的内部空间有限以容纳客体时,PSO-LJ 方法在客体取向上可以重现 BzI@(,)的 DFT 结果。相反,在具有足够大空间允许客体自由移动的纳米管中,对应于弱管限制,PSO-LJ 方法产生的客体取向与通过 DFT 计算得到的不同;然而,两种方法得到的客体取向在能量上相近。因此,PSO-LJ 方法辅助的 DFT 计算可以在弱管限制下快速提供 BzI@(,)中能量稳定的客体取向,而在通常使用单个初始几何结构的 DFT 计算中这可能会被忽略。