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实时荧光 PCR 法检测新鲜猪肉汁液中的非洲猪瘟病毒

Validation of a real-time PCR assay for the detection of African swine fever virus in fresh pork meat juice.

机构信息

Istituto Zooprofilattico Sperimentale dell'Abruzzo e Molise-IZSAM, Teramo, Italy.

Institute for Diagnosis and Animal Health, Bucharest, Romania; Faculty of Veterinary Medicine, Bucharest, Romania.

出版信息

J Virol Methods. 2024 Sep;329:114980. doi: 10.1016/j.jviromet.2024.114980. Epub 2024 Jun 12.

DOI:10.1016/j.jviromet.2024.114980
PMID:38876256
Abstract

African swine fever virus (ASFV) is the etiological agent of African swine fever (ASF), a disease with detrimental effects on the health, welfare, and production of domestic and wild pigs. The ASF laboratory confirmation is based on the analysis of blood, serum and organ samples. However, testing these samples could not be always convenient, economically feasible or possible. This study describes the validation process of a PCR-based assay targeting a portion of p72 gene, used for the molecular detection of ASFV, from meat juice samples obtained from pigs succumbed to ASFV. More specifically, we investigated the capability of a real-time PCR assay to detect ASFV DNA in meat juices obtained from the diaphragmatic muscle along with the correspondent spleens of 55 ASFV-positive pigs and wild boars sampled from confirmed outbreaks in Romania and from 73 ASFV-negative and regularly slaughtered healthy pigs collected in the Abruzzo region (Italy). The test was able to detect viral DNA in both types of samples, with lower Ct values in spleens (mean=21.11, median=20.61) than meat juices (mean=23.08, median=22.40). However, distributions of Ct values were strongly correlated each other (R= 0.83, P<0.001). Considering the distribution of the observed Ct values in the 55 positive meat juice samples, a 1:10 dilution would be able to detect 90 % of positive samples, whereas a 1:100 dilution would reduce the detectability to 78 % of more contaminated samples. As meat juice could be obtained easily from muscles and considering the potential use of this test on pooled samples, it could represent a tool to aid the investigation of ASFV spread.

摘要

非洲猪瘟病毒(ASFV)是非洲猪瘟(ASF)的病原体,对家猪和野猪的健康、福利和生产具有不利影响。ASF 的实验室确认基于血液、血清和器官样本的分析。然而,这些样本的检测并不总是方便、经济可行或可能的。本研究描述了一种针对 p72 基因部分的基于 PCR 的检测方法的验证过程,该方法用于从死于 ASF 的猪的肉汁样本中检测 ASFV。更具体地说,我们研究了实时 PCR 检测方法在罗马尼亚确认爆发期间从 55 头 ASFV 阳性猪和野猪以及从阿布鲁佐地区(意大利)收集的 73 头 ASFV 阴性和定期屠宰的健康猪获得的膈肌肌肉肉汁中检测 ASFV DNA 的能力。该测试能够在两种类型的样本中检测到病毒 DNA,脾脏中的 Ct 值较低(平均值=21.11,中位数=20.61),而肉汁中的 Ct 值较高(平均值=23.08,中位数=22.40)。然而,Ct 值的分布彼此强烈相关(R=0.83,P<0.001)。考虑到 55 个阳性肉汁样本中观察到的 Ct 值分布,1:10 稀释液将能够检测到 90%的阳性样本,而 1:100 稀释液将使更污染的样本的检测率降低至 78%。由于肉汁可以从肌肉中轻易获得,并且考虑到该测试在混合样本上的潜在用途,它可以作为辅助 ASF 传播调查的工具。

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