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牛乳中即时乳腺炎病原体生物传感:从学术性样品制备新方法到工业原型的现场测试

Point-of-need mastitis pathogen biosensing in bovine milk: From academic sample preparation novelty to industry prototype field testing.

作者信息

Fitzpatrick Kira J, Rohlf Hayden J, Phillips Grant, Macaulay R Bruce, Anderson Will, Price Rochelle, Wood Caitlin, James Ameh, Langhorne Charlotte, Te Brake Bill, Gibson Justine S, Koo Kevin M

机构信息

XING Applied Research & Assay Development (XARAD) Division, XING Technologies Pty Ltd, QLD, 4073, Australia.

XING Applied Research & Assay Development (XARAD) Division, XING Technologies Pty Ltd, QLD, 4073, Australia.

出版信息

Talanta. 2024 Sep 1;277:126424. doi: 10.1016/j.talanta.2024.126424. Epub 2024 Jun 18.

DOI:10.1016/j.talanta.2024.126424
PMID:38897015
Abstract

Bovine mastitis is an inflammation of the mammary gland, and it is the most common infectious disease in dairy cattle. Mastitis reduces milk yield and quality, costing dairy farmers millions of dollars each year. The aim of this study was to develop a point-of-need test for identifying mastitis pathogens that is field portable, cost-effective and can be used with minimal training. Using a proprietary polymer-based milk sample preparation method to rapidly extract pathogen DNA in milk samples, we demonstrated quantitative Polymerase Chain Reaction (qPCR) assays for six common bovine bacterial mastitis pathogens: Staphylococcus aureus, Streptococcus agalactiae, Streptococcus dysgalactiae, Streptococcus uberis, Mycoplasma bovis and Escherichia coli. We also implemented this sample preparation method on a prototype point-of-need system in a proof-of-concept field trial to evaluate user experience. Importantly, the protype system enabled a sample-to-result turnaround time of within 70 min to quantitatively detect all six target pathogens. The key advantage of our point-of-need prototype system is being culture-independent yet providing automated milk sample preparation for molecular identification of key mastitis pathogens by non-expert users. Our point-of-need prototype system showed a good correlation to laboratory-based qPCR for target pathogen detection outcomes, thus potentially removing the need for milk samples to be transported off-site for laboratory testing. Above all, we successfully achieved our objective of developing a point-of-need biosensor technology for mastitis and increased its readiness level with industry partners towards technology commercialization.

摘要

牛乳腺炎是乳腺的一种炎症,是奶牛中最常见的传染病。乳腺炎会降低牛奶产量和质量,每年给奶农造成数百万美元的损失。本研究的目的是开发一种即时检测方法,用于识别乳腺炎病原体,该方法便于携带、成本效益高,且只需极少培训即可使用。我们使用一种基于专有聚合物的牛奶样品制备方法快速提取牛奶样品中的病原体DNA,展示了针对六种常见牛细菌性乳腺炎病原体的定量聚合酶链反应(qPCR)检测方法,这六种病原体分别是金黄色葡萄球菌、无乳链球菌、停乳链球菌、乳房链球菌、牛支原体和大肠杆菌。我们还在一个概念验证现场试验中的即时检测原型系统上实施了这种样品制备方法,以评估用户体验。重要的是,该原型系统能够在70分钟内实现从样品到结果的周转时间,以定量检测所有六种目标病原体。我们的即时检测原型系统的关键优势在于不依赖培养,同时为非专业用户提供用于关键乳腺炎病原体分子鉴定的自动化牛奶样品制备。我们的即时检测原型系统在目标病原体检测结果方面与基于实验室的qPCR显示出良好的相关性,因此有可能无需将牛奶样品运到现场外进行实验室检测。最重要的是,我们成功实现了开发用于乳腺炎的即时检测生物传感器技术这一目标,并与行业合作伙伴提高了该技术朝着商业化发展的准备水平。

相似文献

1
Point-of-need mastitis pathogen biosensing in bovine milk: From academic sample preparation novelty to industry prototype field testing.牛乳中即时乳腺炎病原体生物传感:从学术性样品制备新方法到工业原型的现场测试
Talanta. 2024 Sep 1;277:126424. doi: 10.1016/j.talanta.2024.126424. Epub 2024 Jun 18.
2
Assessment of an extraction protocol to detect the major mastitis-causing pathogens in bovine milk.评估一种提取方案以检测牛乳中的主要乳腺炎致病菌。
J Dairy Sci. 2011 May;94(5):2171-84. doi: 10.3168/jds.2010-3669.
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Rapid identification of bovine mastitis pathogens by high-resolution melt analysis of 16S rDNA sequences.利用 16S rDNA 序列高分辨率熔解曲线分析快速鉴定奶牛乳腺炎病原体。
Vet Microbiol. 2012 Mar 23;155(2-4):332-40. doi: 10.1016/j.vetmic.2011.08.033. Epub 2011 Sep 3.
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Presence of pathogen DNA in milk harvested from quarters is associated to changes in cows' milk yield and composition.从奶区采集的牛奶中存在病原体 DNA 与奶牛产奶量和成分的变化有关。
BMC Vet Res. 2024 Jun 7;20(1):249. doi: 10.1186/s12917-024-04083-y.
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Within-herd prevalence thresholds for herd-level detection of mastitis pathogens using multiplex real-time PCR in bulk tank milk samples.利用批量奶样多重实时 PCR 检测牛群乳腺炎病原体的牛群内流行阈值。
J Dairy Sci. 2017 Oct;100(10):8287-8295. doi: 10.3168/jds.2016-12385. Epub 2017 Aug 2.
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Technical note: Improved method for rapid DNA extraction of mastitis pathogens directly from milk.技术说明:直接从牛奶中快速提取乳腺炎病原体DNA的改进方法。
J Dairy Sci. 2006 Jan;89(1):163-9. doi: 10.3168/jds.S0022-0302(06)72080-X.
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Development of a novel biochip for rapid multiplex detection of seven mastitis-causing pathogens in bovine milk samples.一种用于快速多重检测牛奶样本中七种引起乳腺炎病原体的新型生物芯片的研发。
J Vet Diagn Invest. 2008 Jul;20(4):463-71. doi: 10.1177/104063870802000408.
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Development and evaluation of 4 loop-mediated isothermal amplification assays to detect mastitis-causing bacteria in bovine milk samples.用于检测牛乳样品中引起乳腺炎细菌的4种环介导等温扩增检测方法的开发与评估
J Dairy Sci. 2020 Sep;103(9):8407-8420. doi: 10.3168/jds.2019-18035. Epub 2020 Jun 18.
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Multiplex polymerase chain reaction as a mastitis screening test for Staphylococcus aureus, Streptococcus agalactiae, Streptococcus dysgalactiae and Streptococcus uberis in bulk milk samples.多重聚合酶链反应作为散装牛奶样本中金黄色葡萄球菌、无乳链球菌、停乳链球菌和乳房链球菌乳腺炎筛查试验。
J Dairy Res. 2003 May;70(2):149-55. doi: 10.1017/s0022029903006010.
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Molecular and phenotypic identification of bacterial species isolated from cows with mastitis from three regions of Poland.从波兰三个地区的乳腺炎奶牛中分离的细菌种的分子和表型鉴定。
BMC Vet Res. 2024 May 11;20(1):193. doi: 10.1186/s12917-023-03869-w.

引用本文的文献

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Direct On-Chip Diagnostics of / Complex in Bovine Mastitis Using Bioinformatics-Driven Portable qPCR.使用生物信息学驱动的便携式qPCR对牛乳腺炎中的/复合物进行直接芯片诊断。
Biomolecules. 2024 Dec 18;14(12):1624. doi: 10.3390/biom14121624.