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欣克斯苔藓虫(1880年)(苔藓虫纲:裸唇纲:唇口目)的完整线粒体基因组:膜孔苔藓虫亚目内两种附着在海带表面的苔藓虫的系统发育关系

The complete mitochondrial genome of Hincks, 1880 (Bryozoa: Gymnolaemata: Cheilostomatida): phylogenetic relationship of two kelp-encrusting bryozoans within the suborder Membraniporina.

作者信息

Noh Geon Woo, Lee Sang-Hwa, Chae Hyun Sook, Yang Ho Jin, Yoo Hyun Il, Seo Ji Eun

机构信息

Department of Food Science and Biotechnology, Graduate School, Woosuk University, Wanju, Republic of Korea.

Invertebrate Diversity Institute (InDI), Cheongju, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2024 Jun 18;9(6):782-786. doi: 10.1080/23802359.2024.2364755. eCollection 2024.

Abstract

The two commonest kelp-encrusting bryozoans, and , are difficult to distinguish morphologically. Molecular studies of should thus be helpful for the identification of both species because the mitogenome of was already sequenced. The complete mitogenome of collected from Sinjido was determined in this study through Illumina NovaSeq sequencing. Maximum-likelihood (ML) analysis was based on concatenated 13 protein-coding genes dataset from nine bryozoan species. The mitogenome length was 15,407 bp, and its gene arrangement was similar to those of the mitogenome of other membraniporids, having 13 PCGs, two ribosomal RNAs, and 22 tRNAs. It had an overall A + T content of 63.7% (29.7% A, 16.7% C, 19.6% G, and 34.0% T). and showed sequence differences of 20% for the total length of mitogenome and 16.1.% for 13 PCGs. Molecular data definitely consider them to be separate species. Phylogenetic analyses based on the amino acids of 13 PCGs indicated that has the closest relationship with another kelp-encrusting bryozoan, of membraniporids. The phylogenetic position of genera and families within the suborder Membraniporina coincides with the Bayesian phylogenetic analysis of the mixed concatenated alignment consisting of three partitions.

摘要

两种最常见的附着在海带表面的苔藓虫,即[物种1]和[物种2],在形态上很难区分。因此,对[物种1]的分子研究将有助于这两个物种的鉴定,因为[物种1]的线粒体基因组已经测序。本研究通过Illumina NovaSeq测序确定了从新智岛采集的[物种1]的完整线粒体基因组。最大似然(ML)分析基于来自9种苔藓虫物种的13个串联蛋白质编码基因数据集。线粒体基因组长度为15407 bp,其基因排列与其他膜孔苔藓虫的线粒体基因组相似,有13个蛋白质编码基因、两个核糖体RNA和22个转运RNA。其A+T总含量为63.7%(A为29.7%,C为16.7%,G为19.6%,T为34.0%)。[物种1]和[物种2]的线粒体基因组全长序列差异为20%,13个蛋白质编码基因的差异为16.1%。分子数据明确认为它们是不同的物种。基于13个蛋白质编码基因氨基酸的系统发育分析表明,[物种1]与膜孔苔藓虫的另一种附着在海带表面的苔藓虫[物种3]关系最为密切。膜孔苔藓虫亚目内属和科的系统发育位置与由三个分区组成的混合串联比对的贝叶斯系统发育分析结果一致。

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