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长链非编码 RNA 在铁死亡和铜死亡中对肝癌的预后和治疗的影响。

Long non-coding RNAs in ferroptosis and cuproptosis impact on prognosis and treatment in hepatocellular carcinoma.

机构信息

Department of Gastroenterology, The First People's Hospital of Lianyungang, Lianyungang, China.

Department of Oncology, Zhujiang Hospital, Southern Medical University, Guangzhou, China.

出版信息

Clin Exp Med. 2024 Jun 22;24(1):135. doi: 10.1007/s10238-024-01397-x.

Abstract

Ferroptosis and cuproptosis are recently discovered forms of cell death that have gained interest as potential cancer treatments, particularly for hepatocellular carcinoma. Long non-coding RNAs (lncRNAs) influence cancer cell activity by interacting with various nucleic acids and proteins. However, the role of ferroptosis and cuproptosis-related lncRNAs (FCRLs) in cancer remains underexplored. Ferroptosis and cuproptosis scores for each sample were assessed using Gene Set Variation Analysis (GSVA). Weighted correlation network analysis identified the FCRLs most relevant to our study. A risk model based on FCRLs was developed to categorize patients into high-risk and low-risk groups. We then compared overall survival (OS), tumor immune microenvironment, and clinical characteristics between these groups. The IPS score and ImmuCellAI webpage were used to predict the association between FCRL-related signatures and immunotherapy response. Finally, we validated the accuracy of FCRLs in hepatocellular carcinoma cell lines using induction agents (elesclomol and erastin). Patients in different risk subgroups showed significant differences in OS, immune cell infiltration, pathway activity, and clinical characteristics. Cellular assays revealed significant changes in the expression of AC019080.5, AC145207.5, MIR210HG, and LINC01063 in HCC cell lines following the addition of ferroptosis and cuproptosis inducers. We created a signature of four FCRLs that accurately predicted survival in HCC patients, laid the foundation for basic research related to ferroptosis and cuproptosis in hepatocellular carcinoma, and provided therapeutic recommendations for HCC patients.

摘要

铁死亡和铜死亡是最近发现的细胞死亡形式,作为潜在的癌症治疗方法引起了关注,尤其是对肝细胞癌。长链非编码 RNA(lncRNA)通过与各种核酸和蛋白质相互作用来影响癌细胞活性。然而,铁死亡和铜死亡相关 lncRNA(FCRL)在癌症中的作用仍未得到充分探索。使用基因集变异分析(GSVA)评估每个样本的铁死亡和铜死亡评分。加权相关网络分析确定了与我们的研究最相关的 FCRL。基于 FCRL 开发了一个风险模型,将患者分为高风险和低风险组。然后,我们比较了这些组之间的总生存期(OS)、肿瘤免疫微环境和临床特征。使用 IPS 评分和 ImmuCellAI 网页预测了 FCRL 相关特征与免疫治疗反应之间的关联。最后,我们使用诱导剂(elesclomol 和 erastin)在肝细胞癌细胞系中验证了 FCRL 的准确性。不同风险亚组的患者在 OS、免疫细胞浸润、途径活性和临床特征方面存在显著差异。细胞实验表明,在加入铁死亡和铜死亡诱导剂后,HCC 细胞系中 AC019080.5、AC145207.5、MIR210HG 和 LINC01063 的表达发生了显著变化。我们创建了一个由四个 FCRL 组成的signature,可以准确预测 HCC 患者的生存情况,为肝细胞癌中铁死亡和铜死亡相关的基础研究奠定了基础,并为 HCC 患者提供了治疗建议。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/807b/11193701/b09c73376e5b/10238_2024_1397_Fig1_HTML.jpg

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