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启动子依赖性 RNA 聚合酶 II 绕过可互变异构的 DNA 损伤,Fapy•dG 和 8-氧代-2'-脱氧鸟苷。

Promoter dependent RNA polymerase II bypass of the epimerizable DNA lesion, Fapy•dG and 8-Oxo-2'-deoxyguanosine.

机构信息

Department of Chemistry, Johns Hopkins University, Baltimore, MD 21218, USA.

Department of Chemistry, Stanford University, Stanford, CA 94305, USA.

出版信息

Nucleic Acids Res. 2024 Jul 22;52(13):7437-7446. doi: 10.1093/nar/gkae529.


DOI:10.1093/nar/gkae529
PMID:38908029
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11260475/
Abstract

Formamidopyrimidine (Fapy•dG) is a major lesion arising from oxidation of dG that is produced from a common chemical precursor of 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-OxodGuo). In human cells, replication of single-stranded shuttle vectors containing Fapy•dG is more mutagenic than 8-OxodGuo. Here, we present the first data regarding promoter dependent RNA polymerase II bypass of Fapy•dG. 8-OxodGuo bypass was examined side-by-side. Experiments were carried out using double-stranded shuttle vectors in HeLa cell nuclear lysates and in HEK 293T cells. The lesions do not significantly block transcriptional bypass efficiency. Less than 2% adenosine incorporation occurred in cells when the lesions were base paired with dC. Inhibiting base excision repair in HEK 293T cells significantly increased adenosine incorporation, particularly from Fapy•dG:dC bypass which yielded ∼25% adenosine incorporation. No effect was detected upon transcriptional bypass of either lesion in nucleotide excision repair deficient cells. Transcriptional mutagenesis was significantly higher when shuttle vectors containing dA opposite one of the lesions were employed. For Fapy•dG:dA bypass, adenosine incorporation was greater than 85%; whereas 8-OxodGuo:dA yielded >20% point mutations. The combination of more frequent replication mistakes and greater error-prone Pol II bypass suggest that Fapy•dG is more mutagenic than 8-OxodGuo.

摘要

甲酰胺嘧啶(Fapy•dG)是一种主要的损伤,它是由 8-氧代-7,8-二氢-2'-脱氧鸟苷(8-OxodGuo)的常见化学前体产生的 dG 氧化而来。在人类细胞中,含有 Fapy•dG 的单链穿梭载体的复制比 8-OxodGuo 更具突变性。在这里,我们首次提供了关于依赖启动子的 RNA 聚合酶 II 绕过 Fapy•dG 的数据。同时检查了 8-OxodGuo 的绕过情况。实验是在 HeLa 细胞核裂解物和 HEK 293T 细胞中使用双链穿梭载体进行的。这些损伤不会显著阻断转录旁路效率。当损伤与 dC 碱基配对时,细胞中不到 2%的腺嘌呤掺入。在 HEK 293T 细胞中抑制碱基切除修复显著增加了腺嘌呤掺入,特别是 Fapy•dG:dC 旁路的掺入率约为 25%。在核苷酸切除修复缺陷细胞中,两种损伤的转录旁路均未检测到影响。当使用含有一个损伤的 dA 对面的穿梭载体时,转录突变明显更高。对于 Fapy•dG:dA 旁路,腺嘌呤掺入大于 85%;而 8-OxodGuo:dA 产生超过 20%的点突变。更频繁的复制错误和更易错的 Pol II 旁路的结合表明,Fapy•dG 比 8-OxodGuo 更具突变性。

相似文献

[1]
Promoter dependent RNA polymerase II bypass of the epimerizable DNA lesion, Fapy•dG and 8-Oxo-2'-deoxyguanosine.

Nucleic Acids Res. 2024-7-22

[2]
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[3]
Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG.

J Am Chem Soc. 2024-3-6

[4]
Synergistic effects on mutagenicity of tandem lesions containing 8-oxo-7,8-dihydro-2'-deoxyguanosine or Fapy•dG flanked by a 3' 5-formyl-2'-deoxyuridine in human cells.

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[5]
8-OxodGuo and Fapy•dG Mutagenicity in Increases Significantly when They Are Part of a Tandem Lesion with 5-Formyl-2'-deoxyuridine.

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[6]
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[7]
Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication.

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[8]
8-Oxo-2'-deoxyguanosine Replication in Mutational Hot Spot Sequences of the Gene in Human Cells Is Less Mutagenic than That of the Corresponding Formamidopyrimidine.

Chem Res Toxicol. 2023-5-15

[9]
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[10]
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引用本文的文献

[1]
Inhibition by 4-(4-Bromo-2-oxo-3-benzimidazol-1-yl)--(4-iodophenyl)piperidine-1-carboxamide (TH5487) of the Activity of Human 8-Oxoguanine DNA Glycosylase-1 (OGG1) for the Excision of 2,6-Diamino-4-hydroxy-5-formamidopyrimidine, 4,6-Diamino-5-formamidopyrimidine, and 8-Oxoguanine from Oxidatively Damaged DNA.

Biochemistry. 2025-4-15

[2]
Therapeutic upregulation of DNA repair pathways: strategies and small molecule activators.

RSC Med Chem. 2024-10-11

[3]
Role of MTH1 in oxidative stress and therapeutic targeting of cancer.

Redox Biol. 2024-11

本文引用的文献

[1]
Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG.

J Am Chem Soc. 2024-3-6

[2]
Synergistic effects on mutagenicity of tandem lesions containing 8-oxo-7,8-dihydro-2'-deoxyguanosine or Fapy•dG flanked by a 3' 5-formyl-2'-deoxyuridine in human cells.

DNA Repair (Amst). 2023-9

[3]
8-Oxo-2'-deoxyguanosine Replication in Mutational Hot Spot Sequences of the Gene in Human Cells Is Less Mutagenic than That of the Corresponding Formamidopyrimidine.

Chem Res Toxicol. 2023-5-15

[4]
Establishing Linkages Among DNA Damage, Mutagenesis, and Genetic Diseases.

Chem Res Toxicol. 2022-10-17

[5]
Transcriptional Perturbations of 2,6-Diaminopurine and 2-Aminopurine.

ACS Chem Biol. 2022-7-15

[6]
Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication.

J Am Chem Soc. 2022-5-11

[7]
RNA polymerase pausing, stalling and bypass during transcription of damaged DNA: from molecular basis to functional consequences.

Nucleic Acids Res. 2022-4-8

[8]
Signatures of TOP1 transcription-associated mutagenesis in cancer and germline.

Nature. 2022-2

[9]
Sequence context effects of replication of Fapy•dG in three mutational hot spot sequences of the p53 gene in human cells.

DNA Repair (Amst). 2021-12

[10]
Structural basis of DNA synthesis opposite 8-oxoguanine by human PrimPol primase-polymerase.

Nat Commun. 2021-6-29

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