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Identification and validation of immunity- and disulfidptosis-related genes signature for predicting prognosis in ovarian cancer.

作者信息

Jin Miaojia, Ni Dan, Cai Jianshu, Yang Jianhua

机构信息

Nursing Department, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, 310016, China.

Department of Obstetrics and Gynecology, Jinhua Jindong District Maternal and Child Health Hospital, Jinhua, 321000, China.

出版信息

Heliyon. 2024 Jun 7;10(12):e32273. doi: 10.1016/j.heliyon.2024.e32273. eCollection 2024 Jun 30.


DOI:10.1016/j.heliyon.2024.e32273
PMID:38952356
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11215265/
Abstract

BACKGROUND: Ovarian cancer (OC) ranks as the fifth most prevalent neoplasm in women and exhibits an unfavorable prognosis. To improve the OC patient's prognosis, a pioneering risk signature was formulated by amalgamating disulfidptosis-related genes. METHODS: A comparative analysis of OC tissues and normal tissues was carried out, and differentially expressed disulfidptosis-related genes (DRGs) were found using the criteria of |log2 (fold change) | > 0.585 and adjusted P-value <0.05. Subsequently, the TCGA training set was utilized to create a prognostic risk signature, which was validated by employing both the TCGA testing set and the GEO dataset. Moreover, the immune cell infiltration, mutational load, response to chemotherapy, and response to immunotherapy were analyzed. To further validate these findings, QRT-PCR analysis was conducted on ovarian tumor cell lines. RESULTS: A risk signature was created using fourteen differentially expressed genes (DEGs) associated with disulfidptosis, enabling the classification of ovarian cancer (OC) patients into high-risk group (HRG) and low-risk group (LRG). The HRG exhibited a lower overall survival (OS) compared to the LRG. In addition, the risk score remained an independent predictor even after incorporating clinical factors. Furthermore, the LRG displayed lower stromal, immune, and estimated scores compared to the HRG, suggesting a possible connection between the risk signature, immune cell infiltration, and mutational load. Finally, the QRT-PCR experiments revealed that eight genes were upregulated in the human OC cell line SKOV3 compared with the human normal OC line IOSE80, while six genes were down-regulated. CONCLUSIONS: A fourteen-biomarker signature composed of disulfidptosis-related genes could serve as a valuable risk stratification tool in OC, facilitating the identification of patients who may benefit from individualized treatment and follow-up management.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/269aff724fb6/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/3db74479abb6/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/ea065b6bea91/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/592f9524c54a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/dc2508a192b0/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/cdba530a942e/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/269aff724fb6/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/3db74479abb6/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/ea065b6bea91/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/592f9524c54a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/dc2508a192b0/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/cdba530a942e/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd9d/11215265/269aff724fb6/gr6.jpg

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引用本文的文献

[1]
Sulfide regulation and catabolism in health and disease.

Signal Transduct Target Ther. 2025-5-30

[2]
Unraveling shared diagnostic genes and cellular microenvironmental changes in endometriosis and recurrent implantation failure through multi-omics analysis.

Sci Rep. 2025-3-17

[3]
Establishment of a prognostic signature and immune infiltration characteristics for uterine corpus endometrial carcinoma based on a disulfidptosis/ferroptosis-associated signature.

Front Immunol. 2025-1-27

[4]
The role of molecular subtypes and immune infiltration characteristics based on disulfidptosis-related genes in ovarian cancer.

Discov Oncol. 2024-10-28

本文引用的文献

[1]
Identification and validation of IRF6 related to ovarian cancer and biological function and prognostic value.

J Ovarian Res. 2024-3-16

[2]
Comprehensive Analysis of Disulfidptosis-Related LncRNAs in Molecular Classification, Immune Microenvironment Characterization and Prognosis of Gastric Cancer.

Biomedicines. 2023-11-28

[3]
Validation of reference genes for the normalization of the RT-qPCR in peripheral blood mononuclear cells of septic patients.

Heliyon. 2023-4-7

[4]
A self-administered immersive virtual reality tool for assessing cognitive impairment in patients with cancer.

Asia Pac J Oncol Nurs. 2023-2-28

[5]
Sensitivity Analysis for Survival Prognostic Prediction with Gene Selection: A Copula Method for Dependent Censoring.

Biomedicines. 2023-3-6

[6]
Identification of novel key genes associated with uterine corpus endometrial carcinoma progression and prognosis.

Ann Transl Med. 2023-1-31

[7]
Actin cytoskeleton vulnerability to disulfide stress mediates disulfidptosis.

Nat Cell Biol. 2023-3

[8]
Ovarian cancer subtypes based on the regulatory genes of RNA modifications: Novel prediction model of prognosis.

Front Endocrinol (Lausanne). 2022

[9]
Platinum-resistance in epithelial ovarian cancer: an interplay of epithelial-mesenchymal transition interlinked with reprogrammed metabolism.

J Transl Med. 2022-12-3

[10]
Establishment of an ovarian cancer omentum metastasis-related prognostic model by integrated analysis of scRNA-seq and bulk RNA-seq.

J Ovarian Res. 2022-11-23

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