用于线粒体基因组的基因组组装和系统发育组定位的离子激流数据，重点关注猫鲨（软骨鱼纲：皱唇鲨科）。
Ion Torrent data for the genome assembly and phylogenomic placement of mitochondrial genomes with a focus on houndsharks (Chondrichthyes: Triakidae).
作者信息
Winn Jessica C, Bester-van der Merwe Aletta E, Maduna Simo N
机构信息
Molecular Breeding and Biodiversity Group, Department of Genetics, Stellenbosch University, Stellenbosch, Western Cape, 7602, South Africa.
Department of Ecosystems in the Barents Region, Svanhovd Research Station, Norwegian Institute of Bioeconomy Research, 9925 Svanvik, Norway.
出版信息
Data Brief. 2024 Mar 1;54:110280. doi: 10.1016/j.dib.2024.110280. eCollection 2024 Jun.
Here, we present, for the first time, the Ion Torrent next-generation sequencing (NGS) data for five houndsharks (Chondrichthyes: Triakidae), which include (number of bases pairs (bp) 17,487; GenBank accession number ON652874), (16,708; ON652873), (16,755; ON075077), (16,708; ON075076), and (16,746; ON075075). All assembled mitogenomes encode 13 protein-coding genes (PCGs), two ribosomal (r)RNA genes, and 22 transfer (t)RNA genes ( and are duplicated), except for which contains 23 tRNA genes where is duplicated. The data presented in this paper can assist other researchers in further elucidating the diversification of triakid species and the phylogenetic relationships within Carcharhiniformes (groundsharks) as mitogenomes accumulate in public repositories.
在此，我们首次展示了五条猎犬鲨（软骨鱼纲：真鲨科）的离子激流新一代测序（NGS）数据，其中包括（碱基对数（bp）17,487；GenBank登录号ON652874）、（16,708；ON652873）、（16,755；ON075077）、（16,708；ON075076）和（16,746；ON075075）。所有组装的线粒体基因组都编码13个蛋白质编码基因（PCGs）、两个核糖体（r）RNA基因和22个转移（t）RNA基因（和被重复），但除外，它包含23个tRNA基因，其中被重复。随着线粒体基因组在公共数据库中积累，本文所呈现的数据可帮助其他研究人员进一步阐明真鲨科物种的多样化以及真鲨目（真鲨）内的系统发育关系。
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