人参养荣汤治疗继发性不适和疲劳:网络药理学和孟德尔随机化研究
Renshen Yangrong decoction for secondary malaise and fatigue: network pharmacology and Mendelian randomization study.
作者信息
Wang Fanghan, Zhu Liping, Cui Haiyan, Guo Shanchun, Wu Jingliang, Li Aixiang, Wang Zhiqiang
机构信息
Department of Medical Oncology, The Fourth People's Hospital of Zibo, Zibo, China.
Department of Medical Oncology, Shouguang Hospital of Traditional Chinese Medicine, Shouguang, China.
出版信息
Front Nutr. 2024 Jun 20;11:1404123. doi: 10.3389/fnut.2024.1404123. eCollection 2024.
BACKGROUND
Renshen Yangrong decoction (RSYRD) has been shown therapeutic effects on secondary malaise and fatigue (SMF). However, to date, its bioactive ingredients and potential targets remain unclear.
PURPOSE
The purpose of this study is to assess the potential ingredients and targets of RSYRD on SMF through a comprehensive strategy integrating network pharmacology, Mendelian randomization as well as molecular docking verification.
METHODS
Search for potential active ingredients and corresponding protein targets of RSYRD on TCMSP and BATMAN-TCM for network pharmacology analysis. Mendelian randomization (MR) was performed to find therapeutic targets for SMF. The eQTLGen Consortium (sample sizes: 31,684) provided data on cis-expression quantitative trait loci (cis-eQTL, exposure). The summary data on SMF (outcome) from genome-wide association studies (GWAS) were gathered from the MRC-IEU Consortium (sample sizes: 463,010). We built a target interaction network between the probable active ingredient targets of RSYRD and the therapeutic targets of SMF. We next used drug prediction and molecular docking to confirm the therapeutic value of the therapeutic targets.
RESULTS
In RSYRD, network pharmacology investigations revealed 193 possible active compounds and 234 associated protein targets. The genetically predicted amounts of 176 proteins were related to SMF risk in the MR analysis. Thirty-seven overlapping targets for RSYRD in treating SMF, among which six (NOS3, GAA, IMPA1, P4HTM, RB1, and SLC16A1) were prioritized with the most convincing evidence. Finally, the 14 active ingredients of RSYRD were identified as potential drug molecules. The strong affinity between active components and putative protein targets was established by molecular docking.
CONCLUSION
This study revealed several active components and possible RSYRD protein targets for the therapy of SMF and provided novel insights into the feasibility of using Mendelian randomization for causal inference between Chinese medical formula and disease.
背景
人参养荣汤已被证明对继发性不适和疲劳(SMF)具有治疗作用。然而,迄今为止,其生物活性成分和潜在靶点仍不清楚。
目的
本研究旨在通过整合网络药理学、孟德尔随机化以及分子对接验证的综合策略,评估人参养荣汤治疗SMF的潜在成分和靶点。
方法
在中药系统药理学数据库与分析平台(TCMSP)和中药系统生物学与药物设计平台(BATMAN-TCM)上搜索人参养荣汤的潜在活性成分和相应的蛋白质靶点,用于网络药理学分析。进行孟德尔随机化(MR)以寻找SMF的治疗靶点。eQTLGen联盟(样本量:31684)提供了顺式表达定量性状位点(顺式eQTL,暴露)的数据。从医学研究委员会-综合流行病学单位联盟(MRC-IEU联盟,样本量:463010)收集全基因组关联研究(GWAS)中SMF(结果)的汇总数据。我们构建了人参养荣汤可能的活性成分靶点与SMF治疗靶点之间的靶点相互作用网络。接下来,我们使用药物预测和分子对接来确认治疗靶点的治疗价值。
结果
在人参养荣汤中,网络药理学研究揭示了193种可能的活性化合物和234个相关蛋白质靶点。在MR分析中,176种蛋白质的遗传预测量与SMF风险相关。人参养荣汤治疗SMF有37个重叠靶点,其中6个(一氧化氮合酶3、酸性α-葡萄糖苷酶、肌醇-1-磷酸酶1、脯氨酰4-羟化酶亚基β、视网膜母细胞瘤蛋白1和溶质载体家族16成员1)有最令人信服的证据被优先考虑。最后,确定了人参养荣汤的14种活性成分作为潜在药物分子。通过分子对接建立了活性成分与假定蛋白质靶点之间的强亲和力。
结论
本研究揭示了几种治疗SMF的活性成分和可能的人参养荣汤蛋白质靶点,并为使用孟德尔随机化进行中药方剂与疾病之间因果推断的可行性提供了新见解。