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TOPOVIBL 减数分裂 DSB 形成蛋白:其生化和结构特征的新见解。

The TOPOVIBL meiotic DSB formation protein: new insights from its biochemical and structural characterization.

机构信息

Centre de Biologie Structurale (CBS), Univ Montpellier, CNRS, INSERM, 34090 Montpellier, France.

Institut de Génomique Fonctionnelle (IGF), Univ Montpellier, CNRS, INSERM, 34090 Montpellier, France.

出版信息

Nucleic Acids Res. 2024 Aug 27;52(15):8930-8946. doi: 10.1093/nar/gkae587.

DOI:10.1093/nar/gkae587
PMID:38966985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11347134/
Abstract

The TOPOVIL complex catalyzes the formation of DNA double strand breaks (DSB) that initiate meiotic homologous recombination, an essential step for chromosome segregation and genetic diversity during gamete production. TOPOVIL is composed of two subunits (SPO11 and TOPOVIBL) and is evolutionarily related to the archaeal TopoVI topoisomerase complex. SPO11 is the TopoVIA subunit orthologue and carries the DSB formation catalytic activity. TOPOVIBL shares homology with the TopoVIB ATPase subunit. TOPOVIBL is essential for meiotic DSB formation, but its molecular function remains elusive, partly due to the lack of biochemical studies. Here, we purified TOPOVIBLΔC25 and characterized its structure and mode of action in vitro. Our structural analysis revealed that TOPOVIBLΔC25 adopts a dynamic conformation in solution and our biochemical study showed that the protein remains monomeric upon incubation with ATP, which correlates with the absence of ATP binding. Moreover, TOPOVIBLΔC25 interacted with DNA, with a preference for some geometries, suggesting that TOPOVIBL senses specific DNA architectures. Altogether, our study identified specific TOPOVIBL features that might help to explain how TOPOVIL function evolved toward a DSB formation activity in meiosis.

摘要

TOPOVIL 复合物催化 DNA 双链断裂 (DSB) 的形成,该断裂启动减数分裂同源重组,这是配子产生过程中染色体分离和遗传多样性的必要步骤。TOPOVIL 由两个亚基(SPO11 和 TOPOVIBL)组成,与古细菌 TopoVI 拓扑异构酶复合物在进化上相关。SPO11 是 TopoVIA 亚基的同源物,具有 DSB 形成催化活性。TOPOVIBL 与 TopoVIB ATPase 亚基具有同源性。TOPOVIBL 对减数分裂 DSB 的形成是必不可少的,但它的分子功能仍然难以捉摸,部分原因是缺乏生化研究。在这里,我们纯化了 TOPOVIBLΔC25 并在体外表征了其结构和作用方式。我们的结构分析表明,TOPOVIBLΔC25 在溶液中采用动态构象,我们的生化研究表明,该蛋白在与 ATP 孵育时仍保持单体状态,这与缺乏 ATP 结合有关。此外,TOPOVIBLΔC25 与 DNA 相互作用,对某些几何形状有偏好,这表明 TOPOVIBL 可以感知特定的 DNA 结构。总之,我们的研究确定了 TOPOVIBL 的一些特定特征,这些特征可能有助于解释 TOPOVIL 如何在减数分裂中向 DSB 形成活性进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/d80e69ae796a/gkae587fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/9caba18ca967/gkae587figgra1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/f7152b740ff7/gkae587fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/bb94f5a3cdf6/gkae587fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/8c5612fcd86e/gkae587fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/b40d21a93f32/gkae587fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/587cd18a42a9/gkae587fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/d80e69ae796a/gkae587fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/9caba18ca967/gkae587figgra1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/f7152b740ff7/gkae587fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/bb94f5a3cdf6/gkae587fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/8c5612fcd86e/gkae587fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/b40d21a93f32/gkae587fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/587cd18a42a9/gkae587fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d2c/11347134/d80e69ae796a/gkae587fig6.jpg

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2
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必需的 Rec114-Mei4 三聚体界面的结构和 DNA 桥接活性。
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