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心脏蛋白质组学分析发现 MYH6 和 COX5B 可作为突发性不明原因死亡的生物标志物。

Heart proteomic profiling discovers MYH6 and COX5B as biomarkers for sudden unexplained death.

机构信息

Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, PR China.

Department of Forensic Medicine, School of Basic Medical Sciences, Central South University, Changsha, Hunan 410013, PR China.

出版信息

Forensic Sci Int. 2024 Aug;361:112121. doi: 10.1016/j.forsciint.2024.112121. Epub 2024 Jun 26.

Abstract

Sudden unexplained death (SUD) is not uncommon in forensic pathology. Yet, diagnosis of SUD remains challenging due to lack of specific biomarkers. This study aimed to screen differentially expressed proteins (DEPs) and validate their usefulness as diagnostic biomarkers for SUD cases. We designed a three-phase investigation, where in the discovery phase, formalin-fixed paraffin-embedded (FFPE) heart specimens were screened through label-free proteomic analysis of cases dying from SUD, mechanical injury and carbon monoxide (CO) intoxication. A total of 26 proteins were identified to be DEPs for the SUD cases after rigorous criterion. Bioinformatics and Adaboost-recursive feature elimination (RFE) analysis further revealed that three of the 26 proteins (MYH6, COX5B and TNNT2) were potential discriminative biomarkers. In the training phase, MYH6 and COX5B were verified to be true DEPs in cardiac tissues from 29 independent SUD cases as compared with a serial of control cases (n = 42). Receiver operating characteristic (ROC) analysis illustrated that combination of MYH6 and COX5B achieved optimal diagnostic sensitivity (89.7 %) and specificity (84.4 %), with area under the curve (AUC) being 0.91. A diagnostic software based on the logistic regression formula derived from the training phase was then constructed. In the validation phase, the diagnostic software was applied to eight authentic SUD cases, seven (87.5 %) of which were accurately recognized. Our study provides a valid strategy towards practical diagnosis of SUD by integrating cardiac MYH6 and COX5B as dual diagnostic biomarkers.

摘要

猝死者(SUD)在法医学中并不罕见。然而,由于缺乏特异性生物标志物,SUD 的诊断仍然具有挑战性。本研究旨在筛选差异表达蛋白(DEPs),并验证其作为 SUD 病例诊断生物标志物的有用性。我们设计了一个三阶段的研究,在发现阶段,通过对死于 SUD、机械损伤和一氧化碳(CO)中毒的病例的福尔马林固定石蜡包埋(FFPE)心脏标本进行无标记蛋白质组学分析。经过严格的标准,共鉴定出 26 种 DEPs 用于 SUD 病例。生物信息学和 Adaboost-递归特征消除(RFE)分析进一步表明,26 种蛋白质中的三种(MYH6、COX5B 和 TNNT2)是潜在的有区别的生物标志物。在训练阶段,与一系列对照病例(n=42)相比,在 29 例独立的 SUD 病例的心脏组织中验证了 MYH6 和 COX5B 是真正的 DEPs。受试者工作特征(ROC)分析表明,MYH6 和 COX5B 的组合实现了最佳的诊断敏感性(89.7%)和特异性(84.4%),曲线下面积(AUC)为 0.91。然后基于训练阶段得出的逻辑回归公式构建了一个诊断软件。在验证阶段,该诊断软件应用于 8 例真实的 SUD 病例,其中 7 例(87.5%)被准确识别。我们的研究提供了一种有效的策略,通过将心脏 MYH6 和 COX5B 整合为双重诊断生物标志物,用于 SUD 的实际诊断。

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