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本文引用的文献

1
African Swine Fever Virus Gene B117L Encodes a Small Protein Endowed with Low-pH-Dependent Membrane Permeabilizing Activity.非洲猪瘟病毒基因 B117L 编码一种具有低 pH 依赖性膜透性的小蛋白。
J Virol. 2023 Jun 29;97(6):e0035023. doi: 10.1128/jvi.00350-23. Epub 2023 May 22.
2
African swine fever virus transmembrane protein pEP84R guides core assembly.非洲猪瘟病毒跨膜蛋白 pEP84R 指导核心组装。
PLoS Pathog. 2023 Jan 30;19(1):e1011136. doi: 10.1371/journal.ppat.1011136. eCollection 2023 Jan.
3
Light attention predicts protein location from the language of life.轻注意力从生命语言中预测蛋白质位置。
Bioinform Adv. 2021 Nov 19;1(1):vbab035. doi: 10.1093/bioadv/vbab035. eCollection 2021.
4
Complete Structural Predictions of the Proteome of African Swine Fever Virus Strain Georgia 2007.非洲猪瘟病毒格鲁吉亚2007株蛋白质组的完整结构预测
Microbiol Resour Announc. 2022 Dec 15;11(12):e0088122. doi: 10.1128/mra.00881-22. Epub 2022 Nov 21.
5
Molecular recognition of a membrane-anchored HIV-1 pan-neutralizing epitope.膜锚定 HIV-1 泛中和表位的分子识别。
Commun Biol. 2022 Nov 18;5(1):1265. doi: 10.1038/s42003-022-04219-6.
6
ASFV Gene A151R Is Involved in the Process of Virulence in Domestic Swine.ASFV 基因 A151R 参与了家猪的毒力过程。
Viruses. 2022 Aug 21;14(8):1834. doi: 10.3390/v14081834.
7
Deletion of the ASFV dUTPase Gene from the Genome of Highly Virulent African Swine Fever Virus Georgia 2010 Does Not Affect Virus Replication or Virulence in Domestic Pigs.缺失高度致非洲猪瘟病毒 Georgia 2010 株的 dUTPase 基因并不影响病毒在国内猪群中的复制和毒力。
Viruses. 2022 Jun 28;14(7):1409. doi: 10.3390/v14071409.
8
Deletion of the H108R Gene Reduces Virulence of the Pandemic Eurasia Strain of African Swine Fever Virus with Surviving Animals Being Protected against Virulent Challenge.删除 H108R 基因可降低大流行的欧亚谱系非洲猪瘟病毒的毒力,感染存活的动物可免受强毒力的挑战。
J Virol. 2022 Jul 27;96(14):e0054522. doi: 10.1128/jvi.00545-22. Epub 2022 Jul 6.
9
Deletion of African Swine Fever Virus Histone-like Protein, A104R from the Georgia Isolate Drastically Reduces Virus Virulence in Domestic Pigs.从格鲁吉亚分离株中删除非洲猪瘟病毒组蛋白样蛋白 A104R 可极大降低病毒在家猪中的毒力。
Viruses. 2022 May 22;14(5):1112. doi: 10.3390/v14051112.
10
Recombinant ASF Live Attenuated Virus Strains as Experimental Vaccine Candidates.重组 ASF 活毒弱毒株作为实验性疫苗候选株。
Viruses. 2022 Apr 23;14(5):878. doi: 10.3390/v14050878.

非洲猪瘟病毒 B169L 蛋白发夹跨膜结构域的病毒孔道样活性。

Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein.

机构信息

Plum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.

Instituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain.

出版信息

J Virol. 2024 Aug 20;98(8):e0023124. doi: 10.1128/jvi.00231-24. Epub 2024 Jul 9.

DOI:10.1128/jvi.00231-24
PMID:38980063
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11334534/
Abstract

African swine fever virus (ASFV) is the causative agent of a contagious disease affecting wild and domestic swine. The function of B169L protein, as a potential integral structural membrane protein, remains to be experimentally characterized. Using state-of-the-art bioinformatics tools, we confirm here earlier predictions indicating the presence of an integral membrane helical hairpin, and further suggest anchoring of this protein to the ER membrane, with both terminal ends facing the lumen of the organelle. Our evolutionary analysis confirmed the importance of purifying selection in the preservation of the identified domains during the evolution of B169L in nature. Also, we address the possible function of this hairpin transmembrane domain (HTMD) as a class IIA viroporin. Expression of GFP fusion proteins in the absence of a signal peptide supported B169L insertion into the ER as a Type III membrane protein and the formation of oligomers therein. Overlapping peptides that spanned the B169L HTMD were reconstituted into ER-like membranes and the adopted structures analyzed by infrared spectroscopy. Consistent with the predictions, B169L transmembrane sequences adopted α-helical conformations in lipid bilayers. Moreover, single vesicle permeability assays demonstrated the assembly of lytic pores in ER-like membranes by B169L transmembrane helices, a capacity confirmed by ion-channel activity measurements in planar bilayers. Emphasizing the relevance of these observations, pore-forming activities were not observed in the case of transmembrane helices derived from EP84R, another ASFV protein predicted to anchor to membranes through a α-helical HTMD. Overall, our results support predictions of viroporin-like function for the B169L HTMD.IMPORTANCEAfrican swine fever (ASF), a devastating disease affecting domestic swine, is widely spread in Eurasia, producing significant economic problems in the pork industry. Approaches to prevent/cure the disease are mainly restricted to the limited information concerning the role of most of the genes encoded by the large (160-170 kba) virus genome. In this report, we present the experimental data on the functional characterization of the African swine fever virus (ASFV) gene B169L. Data presented here indicates that the B169L gene encodes for an essential membrane-associated protein with a viroporin function.

摘要

非洲猪瘟病毒(ASFV)是一种传染性疾病的病原体,可影响野生和家养猪。B169L 蛋白作为一种潜在的整合膜结构蛋白,其功能仍有待实验表征。我们使用最先进的生物信息学工具,在这里进一步证实了早期的预测,即存在一个整合膜螺旋发夹,并且进一步表明该蛋白锚定在内质网膜上,两端都朝向细胞器的腔。我们的进化分析证实了在自然进化过程中,选择压力对 B169L 中所鉴定结构域的保存具有重要意义。此外,我们还探讨了这个跨膜发夹结构域(HTMD)作为 IIA 类病毒孔蛋白的可能功能。在没有信号肽的情况下表达 GFP 融合蛋白,支持 B169L 插入内质网作为 III 型膜蛋白,并在其中形成寡聚体。跨越 B169L HTMD 的重叠肽被重建到内质网样膜中,并通过红外光谱分析其采用的结构。与预测一致,B169L 跨膜序列在脂质双层中采用α-螺旋构象。此外,通过在 ER 样膜中进行的单囊泡通透性测定,证明了 B169L 跨膜螺旋形成了溶孔,这一能力通过在平面双层中进行的离子通道活性测量得到了证实。强调这些观察结果的相关性,在源自 EP84R 的跨膜螺旋的情况下,没有观察到孔形成活性,EP84R 是另一种被预测通过α-螺旋 HTMD 锚定在膜上的 ASFV 蛋白。总的来说,我们的结果支持 B169L HTMD 具有病毒孔蛋白样功能的预测。重要性非洲猪瘟(ASF)是一种严重影响家猪的疾病,广泛分布于欧亚大陆,给猪肉产业造成了重大的经济问题。预防/治疗这种疾病的方法主要限于对大多数由大型(160-170 kba)病毒基因组编码的基因的作用的有限信息。在本报告中,我们介绍了非洲猪瘟病毒(ASFV)基因 B169L 功能特征的实验数据。这里呈现的数据表明,B169L 基因编码一种具有病毒孔蛋白功能的必需膜相关蛋白。