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2-氧戊二酸取代改变了 Pseudomonas savastanoi 乙烯形成酶的反应结果。

Substitution of 2-oxoglutarate alters reaction outcomes of the Pseudomonas savastanoi ethylene-forming enzyme.

机构信息

Chemistry Research Laboratory, Department of Chemistry and the Ineos Oxford Institute for Antimicrobial Research, University of Oxford, Oxford, United Kingdom.

Chemistry Research Laboratory, Department of Chemistry and the Ineos Oxford Institute for Antimicrobial Research, University of Oxford, Oxford, United Kingdom.

出版信息

J Biol Chem. 2024 Aug;300(8):107546. doi: 10.1016/j.jbc.2024.107546. Epub 2024 Jul 9.

Abstract

In seeding plants, biosynthesis of the phytohormone ethylene, which regulates processes including fruit ripening and senescence, is catalyzed by 1-aminocyclopropane-1-carboxylic acid (ACC) oxidase. The plant pathogen Pseudomonas savastanoi (previously classified as: Pseudomonas syringae) employs a different type of ethylene-forming enzyme (psEFE), though from the same structural superfamily as ACC oxidase, to catalyze ethylene formation from 2-oxoglutarate (2OG) in an arginine dependent manner. psEFE also catalyzes the more typical oxidation of arginine to give L-Δ-pyrroline-5-carboxylate (P5C), a reaction coupled to oxidative decarboxylation of 2OG giving succinate and CO. We report on the effects of C3 and/or C4 substituted 2OG derivatives on the reaction modes of psEFE. H NMR assays, including using the pure shift method, reveal that, within our limits of detection, none of the tested 2OG derivatives is converted to an alkene; some are converted to the corresponding β-hydroxypropionate or succinate derivatives, with only the latter being coupled to arginine oxidation. The NMR results reveal that the nature of 2OG derivatization can affect the outcome of the bifurcating reaction, with some 2OG derivatives exclusively favoring the arginine oxidation pathway. Given that some of the tested 2OG derivatives are natural products, the results are of potential biological relevance. There are also opportunities for therapeutic or biocatalytic regulation of the outcomes of reactions catalyzed by 2OG-dependent oxygenases by the use of 2OG derivatives.

摘要

在植物授粉过程中,植物激素乙烯的生物合成是由 1-氨基环丙烷-1-羧酸(ACC)氧化酶催化的,该过程调节着包括果实成熟和衰老在内的多个过程。植物病原体 Pseudomonas savastanoi(以前被归类为:Pseudomonas syringae)采用了一种不同类型的乙烯形成酶(psEFE),尽管它与 ACC 氧化酶来自同一结构超家族,但它以依赖精氨酸的方式将 2-氧戊二酸(2OG)催化形成乙烯。psEFE 还催化更典型的精氨酸氧化反应,生成 L-Δ-吡咯啉-5-羧酸(P5C),该反应与 2OG 的氧化脱羧反应偶联,生成琥珀酸和 CO。我们报告了 C3 和/或 C4 取代的 2OG 衍生物对 psEFE 反应模式的影响。H NMR 测定法,包括使用纯位移方法,表明在所检测的 2OG 衍生物中,没有一种被转化为烯烃;一些被转化为相应的β-羟基丙酸盐或琥珀酸盐衍生物,只有后者与精氨酸氧化偶联。NMR 结果表明,2OG 衍生化的性质可以影响分叉反应的结果,一些 2OG 衍生物专门有利于精氨酸氧化途径。鉴于一些测试的 2OG 衍生物是天然产物,这些结果具有潜在的生物学相关性。通过使用 2OG 衍生物,也有机会对 2OG 依赖性加氧酶催化的反应的结果进行治疗或生物催化调节。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b68/11345546/7d4614b9da49/gr1.jpg

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