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小非编码RNA IsrR调节三羧酸循环活性和毒力。

The small non-coding RNA IsrR regulates TCA cycle activity and virulence.

作者信息

Rios-Delgado Gustavo, McReynolds Aubrey K G, Pagella Emma A, Norambuena Javiera, Briaud Paul, Zheng Vincent, Munneke Matthew J, Kim Jisun, Racine Hugo, Carroll Ronan, Zelzion Ehud, Skaar Eric, Bose Jeffrey L, Parker Dane, Lalaouna David, Boyd Jeffrey M

机构信息

Department of Biochemistry and Microbiology, Rutgers, the State University of New Jersey, New Brunswick, NJ, 08901, USA.

Department of Microbiology, Molecular Genetics, and Immunology, University of Kansas Medical Center, Kanas City, KS, 66103, USA.

出版信息

bioRxiv. 2024 Jul 4:2024.07.03.601953. doi: 10.1101/2024.07.03.601953.

DOI:10.1101/2024.07.03.601953
PMID:39005296
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11245030/
Abstract

has evolved mechanisms to cope with low iron (Fe) availability in host tissues. uses the ferric uptake transcriptional regulator (Fur) to sense titers of cytosolic Fe. Upon Fe depletion, apo-Fur relieves transcriptional repression of genes utilized for Fe uptake. We demonstrate that an Δ mutant has decreased expression of , which codes for the Fe-dependent enzyme aconitase. Decreased expression prevented the Δ mutant from growing with amino acids as sole carbon and energy sources. Suppressor analysis determined that a mutation in , which produces a regulatory RNA, permitted growth by decreasing transcription. The decreased AcnA activity of the Δ mutant was partially relieved by an Δ mutation. Directed mutation of bases predicted to facilitate the interaction between the transcript and IsrR, decreased the ability of IsrR to control expression and IsrR bound to the transcript . IsrR also bound to the transcripts coding the alternate TCA cycle proteins , , , and . Whole cell metal analyses suggest that IsrR promotes Fe uptake and increases intracellular Fe not ligated by macromolecules. Lastly, we determined that Fur and IsrR promote infection using murine skin and acute pneumonia models.

摘要

已经进化出应对宿主组织中铁(Fe)可用性低的机制。利用铁摄取转录调节因子(Fur)来感知胞质铁的滴度。铁耗尽时,脱辅基Fur解除对用于铁摄取的基因的转录抑制。我们证明一个Δ突变体中编码铁依赖性酶乌头酸酶的基因表达降低。乌头酸酶AcnA表达降低阻止了Δ突变体以氨基酸作为唯一碳源和能源生长。抑制子分析确定,产生调控RNA的基因发生突变,通过降低AcnA转录而允许生长。Δ突变体降低的AcnA活性通过一个Δ突变而部分缓解。对预测有助于AcnA转录本与IsrR之间相互作用的碱基进行定向突变,降低了IsrR控制AcnA表达的能力,并且IsrR与AcnA转录本结合。IsrR还与编码替代三羧酸循环蛋白、、和的转录本结合。全细胞金属分析表明,IsrR促进铁摄取并增加细胞内未与大分子结合的铁。最后,我们利用小鼠皮肤和急性肺炎模型确定Fur和IsrR促进感染。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/49ea807cbc90/nihpp-2024.07.03.601953v1-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/f0090e2ccde0/nihpp-2024.07.03.601953v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/4c70894b0981/nihpp-2024.07.03.601953v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/9bc0cfb55908/nihpp-2024.07.03.601953v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/3c7f56e4a2c3/nihpp-2024.07.03.601953v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/e109ae1a42a1/nihpp-2024.07.03.601953v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/fbb0aa6912da/nihpp-2024.07.03.601953v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/141f56231595/nihpp-2024.07.03.601953v1-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/c7307b73be2b/nihpp-2024.07.03.601953v1-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/49ea807cbc90/nihpp-2024.07.03.601953v1-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/f0090e2ccde0/nihpp-2024.07.03.601953v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/4c70894b0981/nihpp-2024.07.03.601953v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/9bc0cfb55908/nihpp-2024.07.03.601953v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/3c7f56e4a2c3/nihpp-2024.07.03.601953v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/e109ae1a42a1/nihpp-2024.07.03.601953v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/fbb0aa6912da/nihpp-2024.07.03.601953v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/141f56231595/nihpp-2024.07.03.601953v1-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/c7307b73be2b/nihpp-2024.07.03.601953v1-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c361/11245030/49ea807cbc90/nihpp-2024.07.03.601953v1-f0009.jpg

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本文引用的文献

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mBio. 2024 Nov 13;15(11):e0231024. doi: 10.1128/mbio.02310-24. Epub 2024 Oct 23.
2
sRNA IsrR downregulates methylthiotransferase MiaB under iron-deficient conditions.在缺铁条件下,sRNA IsrR 下调甲基硫转移酶 MiaB。
Microbiol Spectr. 2024 Oct 3;12(10):e0388823. doi: 10.1128/spectrum.03888-23. Epub 2024 Aug 20.
3
Copper ions inhibit pentose phosphate pathway function in Staphylococcus aureus.
铜离子抑制金黄色葡萄球菌的戊糖磷酸途径功能。
PLoS Pathog. 2023 May 26;19(5):e1011393. doi: 10.1371/journal.ppat.1011393. eCollection 2023 May.
4
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Nucleic Acids Res. 2022 Aug 26;50(15):8529-8546. doi: 10.1093/nar/gkac648.
5
Kinetic Characterization of the Immune Response to Methicillin-Resistant Staphylococcus aureus Subcutaneous Skin Infection.对耐甲氧西林金黄色葡萄球菌皮下皮肤感染的免疫反应的动力学特征。
Infect Immun. 2022 Jul 21;90(7):e0006522. doi: 10.1128/iai.00065-22. Epub 2022 Jun 1.
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Nutritional immunity: the battle for nutrient metals at the host-pathogen interface.营养免疫:宿主-病原体界面处营养金属的争夺战。
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