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表征[具体物种名缺失]幼虫发育阶段的排泄-分泌产物蛋白质组

Characterizing Excretory-Secretory Products Proteome Across Larval Development Stages in .

作者信息

Castañeda Sergio, Adeniyi-Ipadeola Grace, Wu Yifan, Suarez-Reyes Charlie, Jain Antrix, Ramírez Juan David, Weatherhead Jill E

出版信息

bioRxiv. 2024 Jul 3:2024.07.03.601870. doi: 10.1101/2024.07.03.601870.

Abstract

INTRODUCTION

and are parasitic nematodes that primarily infest the small intestines of humans and pigs, respectively. Ascariasis poses a significant threat to human health and swine health. Understanding larval development is crucial for developing novel therapeutic interventions that will prevent ascariasis in both humans and pigs. This study aimed to characterize the excretory-secretory (ES) proteome of different larval stages (L3-egg, L3-lung, L3-trachea) to identify potential targets for intervention to prevent -induced global morbidity.

METHODS

Stage-specific larvae were isolated, cultured in vitro and ES-product was collected. Third-stage larvae (L3) were isolated from embryonated eggs (L3-egg), isolated from the lungs of Balb/c mice infected with eggs at day 8 post infection (L3-lungs) and isolated from the trachea of Balb/c mice infected with eggs at day 12 post infection (L3-trachea). ES products were obtained by culturing larvae. Proteomic analysis was conducted using liquid chromatography-tandem mass spectrometry (LC-MS/MS) and bioinformatic tools including MaxQuant, Perseus, and Andromeda, following a detailed protocol available on GitHub. The analysis encompassed peptide identification, scoring, and quantification against an organism-specific database, with subsequent quality control, correlation assessment, and differential abundance determination using the Amica algorithm.

RESULTS

A total of 58 unique proteins were identified in the ES products. Fourteen proteins were common across all stages, while others were stage-specific. Principal component analysis revealed distinct protein profiles for each stage, suggesting qualitatively different proteomes. Gene ontology analysis indicated stage-specific GO enrichment of specific protein classes, such as nuclear proteins in L3-egg ES products and metabolic enzymes in L3-lung and L3-trachea ES products.

DISCUSSION

This study revealed stage-specific differences in the composition of ES products. Further investigation into the functional roles of these proteins and their interactions with host cells is crucial for developing novel therapeutic and diagnostic strategies against ascariasis.

摘要

引言

[蛔虫属]和[猪蛔虫]是寄生线虫,分别主要寄生于人类和猪的小肠。蛔虫病对人类健康和猪的健康构成重大威胁。了解[猪蛔虫]幼虫发育对于开发预防人类和猪蛔虫病的新型治疗干预措施至关重要。本研究旨在表征不同[猪蛔虫]幼虫阶段(L3-卵、L3-肺、L3-气管)的排泄-分泌(ES)蛋白质组,以确定预防[猪蛔虫]引起的全球发病率的潜在干预靶点。

方法

分离特定阶段的幼虫,进行体外培养并收集ES产物。第三期[猪蛔虫]幼虫(L3)从感染后第8天感染[猪蛔虫]卵的Balb/c小鼠肺中分离(L3-肺),从感染后第12天感染[猪蛔虫]卵的Balb/c小鼠气管中分离(L3-气管),从胚胎卵中分离(L3-卵)。通过培养幼虫获得ES产物。按照GitHub上提供的详细方案,使用液相色谱-串联质谱(LC-MS/MS)以及包括MaxQuant、Perseus和Andromeda在内的生物信息学工具进行蛋白质组分析。该分析包括针对特定生物体数据库的肽段鉴定、评分和定量,随后使用Amica算法进行质量控制、相关性评估和差异丰度测定。

结果

在ES产物中总共鉴定出58种独特蛋白质。14种蛋白质在所有阶段都有,而其他蛋白质具有阶段特异性。主成分分析揭示了每个阶段不同的蛋白质谱,表明蛋白质组在质量上存在差异。基因本体分析表明特定蛋白质类别的阶段特异性GO富集,例如L3-卵ES产物中的核蛋白以及L3-肺和L3-气管ES产物中的代谢酶。

讨论

本研究揭示了[猪蛔虫]ES产物组成的阶段特异性差异。进一步研究这些蛋白质的功能作用及其与宿主细胞的相互作用对于开发针对蛔虫病的新型治疗和诊断策略至关重要。

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