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生物表面活性剂产生菌解淀粉芽孢杆菌 L2D39 的全基因组序列分析。

Complete genome sequence analysis of a biosurfactant-producing bacterium Bacillus velezensis L2D39.

机构信息

School of Marine Sciences, China University of Geosciences, Beijing 100083, PR China; Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, PR China.

School of Marine Sciences, China University of Geosciences, Beijing 100083, PR China.

出版信息

Mar Genomics. 2024 Aug;76:101113. doi: 10.1016/j.margen.2024.101113. Epub 2024 May 7.

Abstract

Biosurfactants are amphipathic molecules with high industrial values owing to their chemical properties and stability under several environmental conditions. They have become attractive microbial products in the emerging biotechnology industry, offering a potential environmentally-friendly alternative to synthetic surfactants. Nowadays, several types of biosurfactants are commercially available for a wide range of applications in healthcare, agriculture, oil extraction and environmental remediation. In this study, a marine bacterium Bacillus velezensis L2D39 with the capability of producing biosurfactants was successfully isolated and characterized. The complete genome sequence of the bacterium B. velezensis L2D39 was obtained using PacBio Sequel HGAP.4, resulting in a sequence consisting of 4,140,042 base pairs with a 46.2 mol% G + C content and containing 4071 protein-coding genes. The presence of gene clusters associated with biosurfactants was confirmed through antiSMASH detection. The analysis of complete genome sequence will provide insight into the potential applications of this bacterium in biotechnological and natural product biosynthesis.

摘要

生物表面活性剂是具有高工业价值的两亲分子,由于其化学性质和在多种环境条件下的稳定性。它们已成为新兴生物技术产业中具有吸引力的微生物产品,为合成表面活性剂提供了一种潜在的环保替代品。如今,已有多种类型的生物表面活性剂可用于医疗保健、农业、石油开采和环境修复等广泛的应用。在本研究中,成功分离和鉴定了一种具有生产生物表面活性剂能力的海洋细菌 Bacillus velezensis L2D39。使用 PacBio Sequel HGAP.4 获得了细菌 B. velezensis L2D39 的完整基因组序列,序列由 4140042 个碱基对组成,G+C 含量为 46.2 mol%,包含 4071 个蛋白编码基因。通过 antiSMASH 检测证实了与生物表面活性剂相关的基因簇的存在。完整基因组序列的分析将为该细菌在生物技术和天然产物生物合成中的潜在应用提供深入了解。

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