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RECC8 过表达导致配子减数分裂异常,并有助于 AML 的发病机制——多重微阵列分析和孟德尔随机化研究。

Overexpression of REC8 induces aberrant gamete meiotic division and contributes to AML pathogenesis - a multiplexed microarray analysis and mendelian randomization study.

机构信息

National Clinical Research Center for Hematologic Diseases, Jiangsu Institute of Hematology, The First Affiliated Hospital of Soochow University, Suzhou, China.

Institute of Blood and Marrow Transplantation, Collaborative Innovation Center of Hematology, Soochow University, Suzhou, China.

出版信息

Ann Hematol. 2024 Sep;103(9):3563-3572. doi: 10.1007/s00277-024-05882-x. Epub 2024 Jul 16.

Abstract

Acute myeloid leukemia (AML) is a notably lethal disease, characterized by malignant clonal proliferation of hematopoietic stem cells in the bone marrow. This study seeks to unveil potential therapeutic targets for AML, using a combined approach of microarray analysis and Mendelian randomization (MR). We collected data samples from the Gene Expression Omnibus (GEO) database and extracted pQTL data from genome-wide association studies (GWAS) to identify overlapping genes between the DEGs and GWAS data. Gene enrichment and pathway annotation analyses were performed on these genes. Furthermore, we validated gene expression levels and assessed their clinical relevance. By taking the intersection of these gene sets, we obtained a list of co-expressed genes, including four upregulated genes (REC8, TPM2, ZMIZ1, CD82) and two downregulated genes (IFNAR1, TMCO3). MR analysis demonstrated that genetically predicted protein levels of CD82, REC8, ZMIZ1, and TPM2 were significantly associated with increased odds of AML, while IFNAR1 and TMCO3 showed a protective effect. Gene ontology and KEGG pathway analyses revealed significant enrichment in functions related to female gamete generation, meiosis, p53 signaling pathway, and cardiac muscle contraction. Differences in immune cell profiles were observed between AML survivors and those with poor prognosis, including lower levels of neutrophils and higher levels of follicular helper T cells in the latter group. This study identifies a causal relationship between gene expression and AML and highlights the potential role of REC8 in leukemogenesis, possibly through its impact on gametocyte meiotic abnormalities. The findings provide new insights into the prevention and treatment of leukemia.

摘要

急性髓系白血病(AML)是一种致命性疾病,其特征是骨髓中造血干细胞的恶性克隆性增殖。本研究采用基因芯片分析和孟德尔随机化(MR)相结合的方法,旨在为 AML 寻找潜在的治疗靶点。我们从基因表达综合数据库(GEO)中收集数据样本,并从全基因组关联研究(GWAS)中提取 pQTL 数据,以确定差异表达基因(DEGs)与 GWAS 数据之间的重叠基因。对这些基因进行基因富集和通路注释分析。此外,我们还验证了基因表达水平并评估了它们的临床相关性。通过对这些基因集的交集,我们获得了一组共表达基因,包括四个上调基因(REC8、TPM2、ZMIZ1、CD82)和两个下调基因(IFNAR1、TMCO3)。MR 分析表明,CD82、REC8、ZMIZ1 和 TPM2 的遗传预测蛋白水平与 AML 发病风险的增加显著相关,而 IFNAR1 和 TMCO3 则表现出保护作用。基因本体论和 KEGG 通路分析显示,与女性配子发生、减数分裂、p53 信号通路和心肌收缩等功能相关的基因显著富集。AML 幸存者和预后不良者之间的免疫细胞谱存在差异,后者中性粒细胞水平较低,滤泡辅助 T 细胞水平较高。本研究确定了基因表达与 AML 之间的因果关系,并强调了 REC8 在白血病发生中的潜在作用,可能是通过其对配子减数分裂异常的影响。这些发现为白血病的预防和治疗提供了新的思路。

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