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泛癌症分析和实验验证揭示 FAM72D 作为肺腺癌潜在的新型生物标志物和治疗靶点。

Pan-cancer analysis and experimental validation reveal FAM72D as a potential novel biomarker and therapeutic target in lung adenocarcinoma.

机构信息

Department of Respiratory and Critical Care Medicine, Center for Respiratory Medicine, The Fourth Affiliated Hospital, and International School of Medicine, International Institutes of Medicine, Zhejiang University, Yiwu, China.

Graduate School of Bengbu Medical College, Bengbu, Anhui, China.

出版信息

Gene. 2024 Nov 30;928:148764. doi: 10.1016/j.gene.2024.148764. Epub 2024 Jul 14.

Abstract

BACKGROUND

Cancers, particularly lung adenocarcinoma (LUAD), represent a major global health concern. However, the role of FAM72D in various cancers, including LUAD, remains poorly understood.

METHODS

We utilized databases such as The Cancer Genome Atlas (TCGA), Genotype-Tissue Expression Project (GTEx) and online tools to investigate the correlation between FAM72D expression and its prognostic, diagnostic, and mutational significance, as well as its impact on immune cell infiltration across multiple cancers. Additionally, we developed LUAD cell lines overexpressing FAM72D to confirm its oncogenic role.

RESULTS

FAM72D expression was elevated in cancerous tissues compared to noncancerous tissues, with diagnostic and prognostic implications in many cancers, including LUAD. Moreover, associations were identified between FAM72D expression and diverse immune subtypes, alongside factors such as microsatellite instability, neoantigens, and tumour mutational burden across pan-cancers. Additionally, FAM72D was associated with immune infiltration and various immune checkpoint-related genes in LUAD. In vitro experiments demonstrated that FAM72D promoted cell proliferation, colony formation, and migration, while inhibiting apoptosis in LUAD cells.

CONCLUSIONS

Our study establishes associations between FAM72D expression and diagnosis, prognosis, and tumour immunity across multiple cancers, as well as its oncogenic effects in LUAD. FAM72D shows promise as a biomarker and therapeutic target in LUAD.

摘要

背景

癌症,特别是肺腺癌(LUAD),是一个全球性的健康问题。然而,FAM72D 在各种癌症中的作用,包括 LUAD,仍然知之甚少。

方法

我们利用了癌症基因组图谱(TCGA)、基因型组织表达项目(GTEx)和在线工具等数据库,研究了 FAM72D 表达与预后、诊断和突变意义,以及对多种癌症中免疫细胞浸润的影响之间的相关性。此外,我们还开发了过表达 FAM72D 的 LUAD 细胞系,以确认其致癌作用。

结果

与非癌组织相比,FAM72D 在癌组织中的表达升高,在包括 LUAD 在内的许多癌症中具有诊断和预后意义。此外,在泛癌中,FAM72D 表达与多种免疫亚型以及微卫星不稳定性、新抗原和肿瘤突变负荷等因素之间存在关联。此外,FAM72D 与 LUAD 中的免疫浸润和各种免疫检查点相关基因有关。体外实验表明,FAM72D 促进了 LUAD 细胞的增殖、集落形成和迁移,同时抑制了细胞凋亡。

结论

我们的研究在多种癌症中建立了 FAM72D 表达与诊断、预后和肿瘤免疫之间的关联,以及 FAM72D 在 LUAD 中的致癌作用。FAM72D 有望成为 LUAD 的生物标志物和治疗靶点。

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