Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA, USA.
Methods Mol Biol. 2024;2826:55-63. doi: 10.1007/978-1-0716-3950-4_5.
The Assay for Transposase Accessible Chromatin (ATAC)-seq protocol is optimized to generate global maps of accessible chromatin using limited cell inputs. The Tn5 transposase tagmentation reaction simultaneously fragments and tags the accessible DNA with Illumina Nextera sequencing adapters. Fragmented and adapter tagged DNA is then purified and PCR amplified with dual indexing primers to generate a size-specific sequencing library. The One-Step workflow below outlines the Tn5 nuclei transposition from a range of cell inputs followed by PCR amplification to generate a sequencing library.
转座酶可及染色质(ATAC)-seq 分析方案经优化后,可使用有限的细胞输入量生成全基因组可及染色质图谱。Tn5 转座酶的标签酶切反应同时将具有 Illumina Nextera 测序接头的可及 DNA 进行片段化和标记。随后,用双索引引物对片段化和接头标记的 DNA 进行纯化和 PCR 扩增,以生成特定大小的测序文库。下面的分步工作流程概述了从一系列细胞输入物中进行 Tn5 核转位,然后进行 PCR 扩增以生成测序文库的过程。