Li Jun, Wang Xiong, Xue Li, He Qingmin
School of Medicine, Xi'an Jiaotong University, China.
Department of Urology, Ankang Central Hospital, Ankang, 725000, Shaanxi Province, China.
Heliyon. 2024 Jun 19;10(12):e33103. doi: 10.1016/j.heliyon.2024.e33103. eCollection 2024 Jun 30.
Curcumin, a phenolic compound extracted from turmeric rhizomes, exhibits antitumour effects in preclinical models of tumours. However, its mechanism of action in prostate cancer remains unclear. Exploring the molecular mechanisms of curcumin in prostate cancer based on network pharmacology and molecular docking provides a new theoretical basis for prostate cancer treatment.
Using tools such as PharmMapper, SuperPred, TargetNet, and SwissTargetPrediction, we obtained information on curcumin-related targets. We comprehensively collected prostate cancer-related targets from several databases, including GeneCards, CTD, DisGeNET, OMIM, and PharmGKB. Cross-cutting drug-disease targets were then derived by screening using the Venny 2.1.0 tool. Subsequently, we used the DAVID platform to perform in-depth GO and KEGG enrichment analyses of the drug-disease-shared targets. To construct a PPI network map of the cross-targets and screen the 10 core targets, we combined the STRING database and Cytoscape 3.7.2. Molecular docking experiments were performed using AutoDockTools 1.5.7 software. Finally, we used several databases such as GEPIA, HPA, cBioPortal, and TIMER to further analyse the screened core targets in detail.
We identified 307 key targets of curcumin in cancer treatment. After GO functional enrichment analysis, we obtained 1119 relevant entries, including 782 biological progression (BP) entries, 112 cellular component (CC) entries, and 225 molecular function (MF) entries. In addition, KEGG pathway enrichment analysis revealed 126 signalling pathways, which were mainly involved in the cancer pathway, such as lipid and atherosclerosis pathway, PI3K-Akt signal pathway, MAPK signal pathway, Ras signal pathways, and chemical carcinogenesis-reactive oxygen species. By applying Cytoscape 3.7.2 software, we identified SRC, PIK3R1, STAT3, AKT1, HSP90AA1, ESR1, EGFR, HSP90AB1, MAPK8, and MAPK1 as core targets. Molecular docking experiments showed that the binding energies of curcumin to these core targets were all below -1.85 kJ mol, which fully demonstrated that curcumin could spontaneously bind to these core targets. Finally, these results were validated at multiple levels, including mRNA expression, protein expression, and immune infiltration.
Through in-depth network pharmacology and molecular docking studies, we have found that curcumin may have anticancer potential by upregulating the expression of PIK3R1 and STAT3, and downregulating the binding ability of molecules such as SRC, AKT1, HSP90AA1, ESR1, EGFR, HSP90AB1, MAPK8, and MAPK1. In addition, curcumin may interfere with the cyclic process of prostate cancer cells by inhibiting key signalling pathways such as the PI3K-Akt signalling pathway, MAPK signalling pathway, and Ras, thereby inhibiting their growth. This study not only reveals the potential molecular mechanism of curcumin in the treatment of prostate cancer but also provides an important theoretical basis for subsequent research.
姜黄素是从姜黄根茎中提取的一种酚类化合物,在肿瘤临床前模型中具有抗肿瘤作用。然而,其在前列腺癌中的作用机制仍不清楚。基于网络药理学和分子对接探索姜黄素在前列腺癌中的分子机制,为前列腺癌治疗提供新的理论依据。
利用PharmMapper、SuperPred、TargetNet和SwissTargetPrediction等工具,获取姜黄素相关靶点信息。我们从多个数据库全面收集前列腺癌相关靶点,包括GeneCards、CTD、DisGeNET、OMIM和PharmGKB。然后使用Venny 2.1.0工具筛选得出交叉的药物-疾病靶点。随后,我们利用DAVID平台对药物-疾病共享靶点进行深入的基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析。为构建交叉靶点的蛋白质-蛋白质相互作用(PPI)网络图并筛选出10个核心靶点,我们结合了STRING数据库和Cytoscape 3.7.2。使用AutoDockTools 1.5.7软件进行分子对接实验。最后,我们利用GEPIA、人类蛋白质图谱(HPA)、cBioPortal和TIMER等多个数据库对筛选出的核心靶点进行进一步详细分析。
我们确定了姜黄素在癌症治疗中的307个关键靶点。经过GO功能富集分析,我们获得了1119个相关条目,包括782个生物学进程(BP)条目、112个细胞成分(CC)条目和225个分子功能(MF)条目。此外,KEGG通路富集分析揭示了126条信号通路,主要涉及癌症通路,如脂质和动脉粥样硬化通路、磷脂酰肌醇-3激酶(PI3K)-蛋白激酶B(Akt)信号通路、丝裂原活化蛋白激酶(MAPK)信号通路、Ras信号通路以及化学致癌-活性氧物种。通过应用Cytoscape 3.7.2软件,我们确定原癌基因酪氨酸蛋白激酶(SRC)、PI3K调节亚基1(PIK3R1)、信号转导和转录激活因子3(STAT3)、Akt1、热休克蛋白90α家族成员1(HSP90AA1)、雌激素受体1(ESR1)、表皮生长因子受体(EGFR)、热休克蛋白90β家族成员1(HSP90AB1)、丝裂原活化蛋白激酶8(MAPK8)和丝裂原活化蛋白激酶1(MAPK1)为核心靶点。分子对接实验表明,姜黄素与这些核心靶点的结合能均低于-1.85 kJ/mol,充分证明姜黄素能自发结合这些核心靶点。最后,这些结果在多个层面得到验证,包括信使核糖核酸(mRNA)表达、蛋白质表达和免疫浸润。
通过深入的网络药理学和分子对接研究,我们发现姜黄素可能通过上调PIK3R1和STAT3的表达,下调SRC、Akt1、HSP90AA1、ESR1、EGFR、HSP90AB1、MAPK8和MAPK1等分子的结合能力而具有抗癌潜力。此外,姜黄素可能通过抑制PI3K-Akt信号通路、MAPK信号通路和Ras等关键信号通路来干扰前列腺癌细胞的循环过程,从而抑制其生长。本研究不仅揭示了姜黄素治疗前列腺癌的潜在分子机制,也为后续研究提供了重要的理论依据。