Genome, Cell and Developmental Biology Graduate Program, Indiana University, Bloomington, IN 47405, USA.
Department of Biology, Indiana University, Bloomington, IN 47405, USA.
Genetics. 2024 Oct 7;228(2). doi: 10.1093/genetics/iyae114.
RNA-binding proteins (RBPs) play essential roles in coordinating germline gene expression and development in all organisms. Here, we report that loss of ADR-2, a member of the adenosine deaminase acting on RNA family of RBPs and the sole adenosine-to-inosine RNA-editing enzyme in Caenorhabditis elegans, can improve fertility in multiple genetic backgrounds. First, we show that loss of RNA editing by ADR-2 restores normal embryo production to subfertile animals that transgenically express a vitellogenin (yolk protein) fusion to green fluorescent protein. Using this phenotype, a high-throughput screen was designed to identify RBPs that when depleted yield synthetic phenotypes with loss of adr-2. The screen uncovered a genetic interaction between ADR-2 and SQD-1, a member of the heterogeneous nuclear ribonucleoprotein family of RBPs. Microscopy, reproductive assays, and high-throughput sequencing reveal that sqd-1 is essential for the onset of oogenesis and oogenic gene expression in young adult animals and that loss of adr-2 can counteract the effects of loss of sqd-1 on gene expression and rescue the switch from spermatogenesis to oogenesis. Together, these data demonstrate that ADR-2 can contribute to the suppression of fertility and suggest novel roles for both RNA editing-dependent and RNA editing-independent mechanisms in regulating embryogenesis.
RNA 结合蛋白 (RBPs) 在协调所有生物体生殖系基因表达和发育方面发挥着重要作用。在这里,我们报告说,ADR-2 的缺失,一种 RNA 家族的腺苷脱氨酶作用的成员,也是秀丽隐杆线虫中唯一的腺嘌呤到肌苷 RNA 编辑酶,可以改善多种遗传背景下的生育能力。首先,我们表明,ADR-2 的 RNA 编辑缺失可以恢复到转基因表达卵黄蛋白(蛋黄蛋白)融合到绿色荧光蛋白的亚育性动物中正常的胚胎产生。利用这种表型,设计了一个高通量筛选来鉴定当耗尽时会产生与 adr-2 缺失的合成表型的 RBPs。该筛选揭示了 ADR-2 与 SQD-1 之间的遗传相互作用,后者是异质核核糖核蛋白家族的 RBPs 成员。显微镜检查、生殖测定和高通量测序表明,sqd-1 对于年轻成年动物卵母细胞发生和卵母细胞基因表达的起始是必需的,并且 adr-2 的缺失可以抵消 sqd-1 缺失对基因表达的影响,并挽救从精子发生到卵母细胞发生的转变。总之,这些数据表明 ADR-2 可以有助于抑制生育能力,并为 RNA 编辑依赖和非依赖机制在调节胚胎发生中的作用提供新的见解。