Department of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea.
Center for Agricultural Microorganism and Enzyme, Seoul National University, Seoul 08826, Republic of Korea; Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.
Int J Biol Macromol. 2024 Sep;276(Pt 2):134013. doi: 10.1016/j.ijbiomac.2024.134013. Epub 2024 Jul 19.
Lipase with unique regioselectivity is an attractive biocatalyst for elaborate lipid modification. However, the excavation of novel sn-2 regioselective lipases is difficult due to their scarcity in nature, with Candida antarctica lipase A (CALA) being the pronouncedly reported one. Here, we identified a novel CALA-like lipase from Cordyceps militaris (CACML7) via in silico mining. Through chiral-phase high-performance liquid chromatography, we determined that CACML7 displays sn-2 regioselectivity (>68 %) as does CALA, but exhibits distinctive chain length selectivity and bias against unsaturated fats. Notably, the curvature of the acyl-binding tunnel was expected to contribute to the 2.2-fold higher preference for cis-fatty acid (C18:1, cis-Δ) over trans-fatty acid (C18:1, trans-Δ) unlike trans-active CALA. Random pose docking of trioleoylglycerol (TOG) into the active site of a lid-truncated mutant of CACML7 revealed that TOG accepts a tuning fork conformation, of which the precise positioning of the reactive ester group towards the catalytic center was only favorable via sn-2 binding mode. The unique active site morphology, which we refer to as an "acyl-binding tunnel with a narrow entrance," may contribute to the sn-2 regioselectivity of CACML7. Our data provide an attractive model to better understand the mechanism underlying sn-2 regioselectivity.
具有独特区域选择性的脂肪酶是一种有吸引力的生物催化剂,可用于精细的脂质修饰。然而,由于其在自然界中的稀缺性,新型 sn-2 区域选择性脂肪酶的挖掘较为困难,其中报道最多的是南极假丝酵母脂肪酶 A(CALA)。在此,我们通过计算机挖掘,从蛹虫草中鉴定出一种新型的 CALA 样脂肪酶(CACML7)。通过手性相高效液相色谱,我们确定 CACML7 显示出与 CALA 相似的 sn-2 区域选择性(>68%),但表现出独特的链长选择性和对不饱和脂肪的偏好。值得注意的是,与反式活性 CALA 不同,酰基结合隧道的曲率有望导致对顺式脂肪酸(C18:1,顺式-Δ)的偏好增加 2.2 倍,而不是对反式脂肪酸(C18:1,反式-Δ)的偏好。将三油酸甘油酯(TOG)随机放入 CACML7 的一个盖截断突变体的活性位点进行对接,结果表明 TOG 接受了一种音叉构象,其中反应性酯基团朝向催化中心的精确定位仅通过 sn-2 结合模式才是有利的。我们称之为“具有狭窄入口的酰基结合隧道”的独特活性位点形态可能有助于 CACML7 的 sn-2 区域选择性。我们的数据为更好地理解 sn-2 区域选择性的机制提供了一个有吸引力的模型。