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基于均相时间分辨荧光共振能量转移(HTRF)的单磷酸腺苷核糖水解宏观结构域检测及抑制剂筛选分析方法

HTRF-based assay for detection of mono-ADP-ribosyl hydrolyzing macrodomains and inhibitor screening.

作者信息

Ildefeld Niklas, Steinhilber Dieter, Proschak Ewgenij, Heering Jan

机构信息

Institute of Pharmaceutical Chemistry, Goethe-University of Frankfurt, Biocenter, Max-von-Laue-Str. 9, 60438 Frankfurt/Main, Germany.

Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Theodor-Stern-Kai 7, 60596 Frankfurt/Main, Germany.

出版信息

iScience. 2024 Jun 20;27(7):110333. doi: 10.1016/j.isci.2024.110333. eCollection 2024 Jul 19.

DOI:10.1016/j.isci.2024.110333
PMID:39055912
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11269945/
Abstract

The COVID-19 pandemic has highlighted the lack of effective, ready-to-use antivirals for the treatment of viruses with pandemic potential. The development of a diverse drug portfolio is therefore crucial for pandemic preparedness. Viral macrodomains are attractive therapeutic targets as they are suggested to play an important role in evading the innate host immune response, making them critical for viral pathogenesis. Macrodomains function as erasers of mono-ADP-ribosylation (deMARylation), a post-translational modification that is involved in interferon signaling. Herein, we report the development of a modular HTRF-based assay, that can be used to screen for inhibitors of various viral and human macrodomains. We characterized the five most promising small molecule SARS-CoV-2 Mac1 inhibitors recently reported in the literature for potency and selectivity and conducted a pilot screen demonstrating HTS suitability. The ability to directly detect enzymatic activity makes the DeMAR assay a valuable addition to the existing tools for macrodomain drug discovery.

摘要

新冠疫情凸显了缺乏用于治疗具有大流行潜力病毒的有效即用型抗病毒药物的问题。因此,开发多样化的药物组合对于大流行防范至关重要。病毒大结构域是有吸引力的治疗靶点,因为它们被认为在逃避宿主固有免疫反应中起重要作用,这使其对病毒发病机制至关重要。大结构域作为单磷酸腺苷核糖基化的擦除酶(去单磷酸腺苷核糖基化)发挥作用,单磷酸腺苷核糖基化是一种参与干扰素信号传导的翻译后修饰。在此,我们报告了一种基于模块化HTRF的检测方法的开发,该方法可用于筛选各种病毒和人类大结构域的抑制剂。我们对文献中最近报道的五种最有前景的小分子SARS-CoV-2 Mac1抑制剂的效力和选择性进行了表征,并进行了初步筛选以证明其适用于高通量筛选。直接检测酶活性的能力使去单磷酸腺苷核糖基化检测成为大结构域药物发现现有工具的宝贵补充。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/855ad3903360/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/4ea2e0a1d079/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/952173a76b21/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/7ec870bc31a4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/225687c0ac75/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/9b3eb1e5c618/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/855ad3903360/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/4ea2e0a1d079/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/952173a76b21/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/7ec870bc31a4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/225687c0ac75/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/9b3eb1e5c618/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5566/11269945/855ad3903360/gr5.jpg

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本文引用的文献

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PARP14 is a PARP with both ADP-ribosyl transferase and hydrolase activities.PARP14 是一种具有 ADP-ribosyl 转移酶和水解酶活性的 PARP。
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A single inactivating amino acid change in the SARS-CoV-2 NSP3 Mac1 domain attenuates viral replication in vivo.SARS-CoV-2 NSP3 Mac1 结构域中的单个失活氨基酸突变可减弱病毒在体内的复制。
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SARS-CoV-2 Mac1 is required for IFN antagonism and efficient virus replication in cell culture and in mice.SARS-CoV-2 核衣壳蛋白 Mac1 对于在细胞培养和小鼠中发挥 IFN 拮抗作用和实现高效病毒复制是必需的。
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PARP14 is a writer, reader, and eraser of mono-ADP-ribosylation.PARP14 是单 ADP-核糖基化的写入器、读取器和擦除器。
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A Fluorescence Polarization Assay for Macrodomains Facilitates the Identification of Potent Inhibitors of the SARS-CoV-2 Macrodomain.一种用于宏结构域的荧光偏振分析方法有助于鉴定 SARS-CoV-2 宏结构域的有效抑制剂。
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How do German General Practitioners Manage Long-/Post-COVID? A Qualitative Study in Primary Care.德国全科医生如何管理长新冠/后新冠?初级保健中的定性研究。
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Mono-ADP-ribosylation by PARP10 inhibits Chikungunya virus nsP2 proteolytic activity and viral replication.PARP10 的单 ADP-核糖基化抑制基孔肯雅病毒 nsP2 蛋白水解活性和病毒复制。
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Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2.迭代计算设计和晶体筛选鉴定出针对 SARS-CoV-2 的 Nsp3 结构域的有效抑制剂。
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