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增强型即时 SARS-CoV-2 检测:RT-LAMP 与微扫描的整合。

Enhanced Point-of-Care SARS-CoV-2 Detection: Integrating RT-LAMP with Microscanning.

机构信息

BK21 Graduate Program, Department of Biomedical Sciences, College of Medicine, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Republic of Korea.

Department of Laboratory Medicine, College of Medicine, Korea University Guro Hospital, 148 Gurodong-ro, Guro-gu, Seoul 08308, Republic of Korea.

出版信息

Biosensors (Basel). 2024 Jul 17;14(7):348. doi: 10.3390/bios14070348.

DOI:10.3390/bios14070348
PMID:39056624
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11274610/
Abstract

The COVID-19 pandemic has highlighted the urgent need for rapid and accurate diagnostic methods for various infectious diseases, including SARS-CoV-2. Traditional RT-PCR methods, while highly sensitive and specific, require complex equipment and skilled personnel. In response, we developed an integrated RT-LAMP-MS assay, which combines rapid reverse transcription loop-mediated isothermal amplification (RT-LAMP) with microscanning (MS) technology for detecting SARS-CoV-2. The assay uses magnesium pyrophosphate formed during LAMP amplification as a visual marker, allowing direct observation via microscopy without the need for additional chemical indicators or probes. For the SARS-CoV-2/IC RT-LAMP-MS assay, the sample-LAMP reagent mixture was added to a microchip with SARS-CoV-2 primers and internal controls, then incubated at 62 °C for 30 min in a heat block, followed by amplification analysis using a microscanner. In clinical tests, the RT-LAMP-MS assay showed 99% sensitivity and 100% specificity, which is identical to the RT-LAMP results and comparable to the commercial Allplex SARS-CoV-2 assay results. Additionally, the limit of detection (LOD) was determined to be 10 PFU mL (dynamic range: 10~10 PFU mL). The assay delivers results in 30 min, uses low-cost equipment, and demonstrates 100% reproducibility in repeated tests, making it suitable for point-of-care use in resource-limited settings.

摘要

新型冠状病毒肺炎疫情凸显了对各种传染病(包括 SARS-CoV-2)快速准确诊断方法的迫切需求。传统的 RT-PCR 方法虽然具有高度的敏感性和特异性,但需要复杂的设备和熟练的人员。为此,我们开发了一种集成的 RT-LAMP-MS 检测方法,它将快速逆转录环介导等温扩增(RT-LAMP)与微扫描(MS)技术相结合,用于检测 SARS-CoV-2。该检测方法利用 LAMP 扩增过程中形成的焦磷酸镁作为可视化标记物,可直接通过显微镜观察,无需额外的化学指示剂或探针。对于 SARS-CoV-2/IC RT-LAMP-MS 检测方法,将样品-LAMP 试剂混合物添加到带有 SARS-CoV-2 引物和内对照的微芯片中,然后在热块中于 62°C 孵育 30 分钟,随后使用微扫描仪进行扩增分析。在临床测试中,RT-LAMP-MS 检测方法的灵敏度为 99%,特异性为 100%,与 RT-LAMP 结果相同,与商业 Allplex SARS-CoV-2 检测方法的结果相当。此外,检测的下限(LOD)确定为 10 拷贝数每毫升(动态范围:10~10 拷贝数每毫升)。该检测方法可在 30 分钟内得出结果,使用成本低廉的设备,在重复测试中具有 100%的重现性,因此适用于资源有限环境下的即时护理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3903/11274610/7d2ed9d1b7d6/biosensors-14-00348-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3903/11274610/49b2c4d1592e/biosensors-14-00348-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3903/11274610/7d2ed9d1b7d6/biosensors-14-00348-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3903/11274610/49b2c4d1592e/biosensors-14-00348-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3903/11274610/041ef4f79e18/biosensors-14-00348-g002.jpg
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