• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

微生物群落应对游离氨梯度分布的组装过程和共生网络。

Assembly process and co-occurrence network of microbial community in response to free ammonia gradient distribution.

机构信息

Tianjin Key Laboratory of Aqua-Ecology and Aquaculture, College of Fisheries, Tianjin Agricultural University, Tianjin, China.

Frasergen Bioinformatics Co., Ltd, Wuhan, China.

出版信息

Microbiol Spectr. 2024 Sep 3;12(9):e0105124. doi: 10.1128/spectrum.01051-24. Epub 2024 Jul 26.

DOI:10.1128/spectrum.01051-24
PMID:39058029
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11370247/
Abstract

UNLABELLED

Microorganisms are crucial components of the aquatic ecosystem due to their immense diversity and abundance. They are vital in sustaining ecological services, especially in maintaining essential biogeochemical cycles. Recent years have seen a substantial increase in surplus nitrogenous pollutants in aquatic ecosystems due to the heightened occurrence of anthropogenic activities. Elevated levels of free ammonia (FA, NH), stemming from the discharge of excess nitrogenous pollutants, have caused notable fluctuations in aquatic ecosystems, leading to water eutrophication and various ecological challenges. The impact of these oscillations on microbial communities in aquatic ecosystems has not been extensively studied. This study employed 16S rRNA gene amplicon sequencing to systematically investigate the dynamics, co-occurrence networks, and assembly processes of microbial communities and their subcommunities (abundant, moderate, and rare) in the Luanhe River Diversion Project in China. Our findings indicate that NH concentration significantly influences the dynamics of microbial communities, with a notable decrease in community Richness and Phylogenetic Distance alongside increased community dissimilarity under higher NH conditions. The analysis revealed that certain microbial groups, particularly Actinobacteriaota, were notably more prevalent in environments with elevated NH levels, suggesting their potential resilience or adaptive responses to NH stress. Additionally, through co-occurrence network analysis, we observed dynamic changes in network topology and increased connectedness under NH stress. Key nodes, identified as connectors and module hubs, played crucial roles in maintaining network structure, particularly Cyanobacteria and Actinobacteriaota. Furthermore, stochastic processes, particularly drift and dispersal limitation, predominantly shaped the microbial communities. Within the three subcommunities, the impact of drift became more pronounced as the effect of dispersal limitation diminished. Overall, elucidating the dynamics of microbial communities in aquatic ecosystems exposed to NH can enhance our comprehension of the ecological mechanisms of microbial communities and provide new insights into the conservation of microbial community diversity and ecological functions.

IMPORTANCE

The research presented in this paper explores how varying concentrations of free ammonia impact microbial communities in aquatic ecosystems. By employing advanced gene sequencing techniques, the study reveals significant changes in microbial diversity and network structures in response to increased ammonia levels. Key findings indicate that high ammonia concentrations lead to a decrease in microbial richness and diversity while increasing community dissimilarity. Notably, certain microbial groups, like Actinobacteria, show resilience to ammonia stress. This research enhances our understanding of how pollution affects microbial ecosystems and underscores the importance of maintaining balanced ammonia levels to preserve microbial diversity and ecosystem health.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/afa563ef1807/spectrum.01051-24.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/585769c60949/spectrum.01051-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/b8a16a79ebaa/spectrum.01051-24.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/afa563ef1807/spectrum.01051-24.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/585769c60949/spectrum.01051-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/b8a16a79ebaa/spectrum.01051-24.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c56/11370247/afa563ef1807/spectrum.01051-24.f003.jpg
摘要

未加标签

由于微生物的多样性和丰富度,它们是水生生态系统的关键组成部分。它们在维持生态服务方面至关重要,特别是在维持基本的生物地球化学循环方面。近年来,由于人为活动的增加,水生生态系统中过剩的含氮污染物大量增加。过量氮污染物的排放导致游离氨(FA,NH)水平升高,使水生生态系统发生显著波动,导致水体富营养化和各种生态挑战。这些波动对水生生态系统中微生物群落的影响尚未得到广泛研究。本研究采用 16S rRNA 基因扩增子测序,系统研究了中国滦河引水工程中微生物群落及其亚群落(丰富、中等和稀有)的动态、共现网络和组装过程。我们的研究结果表明,NH 浓度显著影响微生物群落的动态,在较高 NH 条件下,群落丰富度和系统发育距离显著降低,群落相似性增加。分析表明,某些微生物类群,特别是放线菌门,在 NH 水平升高的环境中更为普遍,表明它们对 NH 胁迫具有潜在的弹性或适应性反应。此外,通过共现网络分析,我们观察到在 NH 胁迫下网络拓扑结构的动态变化和连通性的增加。关键节点,作为连接器和模块枢纽,在维持网络结构方面发挥着重要作用,特别是蓝藻和放线菌门。此外,随机过程,特别是漂移和扩散限制,主要塑造了微生物群落。在三个亚群落中,随着扩散限制效应的减弱,漂移的影响变得更加明显。总之,阐明暴露于 NH 的水生生态系统中微生物群落的动态可以提高我们对微生物群落生态机制的理解,并为保护微生物群落多样性和生态功能提供新的见解。

意义

本文研究了不同浓度的游离氨如何影响水生生态系统中的微生物群落。通过采用先进的基因测序技术,该研究揭示了微生物多样性和网络结构在应对氨浓度增加时的显著变化。主要发现表明,高氨浓度会导致微生物丰富度和多样性降低,而群落相似性增加。值得注意的是,某些微生物类群,如放线菌,对氨胁迫具有弹性。这项研究增强了我们对污染如何影响微生物生态系统的理解,并强调了维持平衡的氨水平以保护微生物多样性和生态健康的重要性。

相似文献

1
Assembly process and co-occurrence network of microbial community in response to free ammonia gradient distribution.微生物群落应对游离氨梯度分布的组装过程和共生网络。
Microbiol Spectr. 2024 Sep 3;12(9):e0105124. doi: 10.1128/spectrum.01051-24. Epub 2024 Jul 26.
2
Impact of long-term industrial contamination on the bacterial communities in urban river sediments.长期工业污染对城市河流沉积物中细菌群落的影响。
BMC Microbiol. 2020 Aug 14;20(1):254. doi: 10.1186/s12866-020-01937-x.
3
Strong impact of anthropogenic contamination on the co-occurrence patterns of a riverine microbial community.人为污染对河流微生物群落共存模式的强烈影响。
Environ Microbiol. 2017 Dec;19(12):4993-5009. doi: 10.1111/1462-2920.13942. Epub 2017 Dec 7.
4
Assembly dynamics of eukaryotic plankton and bacterioplankton in the Yangtze River estuary: A hybrid community perspective.真核浮游生物和细菌浮游生物在长江口的组装动态:混合群落视角。
Mar Environ Res. 2024 Apr;196:106414. doi: 10.1016/j.marenvres.2024.106414. Epub 2024 Feb 19.
5
Distinct drivers of bacterial community assembly processes in riverine islands in the middle and lower reaches of the Yangtze River.长江中下游河心洲细菌群落组装过程的不同驱动因素
Microbiol Spectr. 2024 Aug 6;12(8):e0081824. doi: 10.1128/spectrum.00818-24. Epub 2024 Jun 13.
6
Spatial distribution and assembly processes of bacterial communities in riverine and coastal ecosystems of a rapidly urbanizing megacity in China.中国快速城市化大都市河川和沿海生态系统中细菌群落的空间分布与组装过程。
Sci Total Environ. 2024 Jul 15;934:173298. doi: 10.1016/j.scitotenv.2024.173298. Epub 2024 May 16.
7
Ecological and evolutionary processes involved in shaping microbial habitat generalists and specialists in urban park ecosystems.塑造城市公园生态系统中微生物生境广义适应者和特化者的生态和进化过程。
mSystems. 2024 Jun 18;9(6):e0046924. doi: 10.1128/msystems.00469-24. Epub 2024 May 20.
8
Estimating taxonomic and functional structure along a tropical estuary: linking metabolic traits and aspects of ecosystem functioning.估算热带河口的分类和功能结构:将代谢特征与生态系统功能方面联系起来。
Microbiol Spectr. 2024 Oct 3;12(10):e0388623. doi: 10.1128/spectrum.03886-23. Epub 2024 Aug 20.
9
Distinct ecological niches and community dynamics: understanding free-living and particle-attached bacterial communities in an oligotrophic deep lake.独特的生态位和群落动态:了解贫营养深湖中自由生活和颗粒附着细菌群落。
Appl Environ Microbiol. 2024 Jul 24;90(7):e0071424. doi: 10.1128/aem.00714-24. Epub 2024 Jun 28.
10
Extreme trophic tales: deciphering bacterial diversity and potential functions in oligotrophic and hypereutrophic lakes.极端营养故事:解析贫营养和富营养湖泊中的细菌多样性和潜在功能。
BMC Microbiol. 2024 Sep 14;24(1):348. doi: 10.1186/s12866-024-03488-x.

引用本文的文献

1
Assessing the Tolerance of Spotted Longbarbel Catfish as a Candidate Species for Aquaculture to Ammonia Nitrogen Exposure.评估长须鲶作为水产养殖候选物种对氨氮暴露的耐受性。
Animals (Basel). 2025 Jul 10;15(14):2035. doi: 10.3390/ani15142035.

本文引用的文献

1
iNAP: An integrated network analysis pipeline for microbiome studies.iNAP:一种用于微生物组研究的综合网络分析流程。
Imeta. 2022 Mar 16;1(2):e13. doi: 10.1002/imt2.13. eCollection 2022 Jun.
2
Destabilized microbial networks with distinct performances of abundant and rare biospheres in maintaining networks under increasing salinity stress.在盐度胁迫增加的情况下,具有不同丰度和稀有生物圈维持网络性能的不稳定微生物网络。
Imeta. 2023 Jan 9;2(1):e79. doi: 10.1002/imt2.79. eCollection 2023 Feb.
3
Comparative toxicology of algal cell extracts and pure cyanotoxins: insights into toxic effects and mechanisms of harmful cyanobacteria Raphidiopsis raciborskii.
藻类细胞提取物与纯藻毒素的比较毒理学:揭示有害蓝藻鱼腥藻毒性作用和机制的研究。
Harmful Algae. 2024 May;135:102635. doi: 10.1016/j.hal.2024.102635. Epub 2024 May 13.
4
Microbial roles in the terrestrial and aquatic nitrogen cycle-implications in climate change.微生物在陆地和水生氮循环中的作用——对气候变化的影响。
FEMS Microbiol Lett. 2023 Jan 17;370. doi: 10.1093/femsle/fnad061.
5
Aridity modulates biogeographic distribution and community assembly of cyanobacterial morphotypes in drylands.干旱调节了干旱地区蓝藻形态的生物地理分布和群落组装。
FEMS Microbiol Ecol. 2023 May 31;99(6). doi: 10.1093/femsec/fiad053.
6
Microbial Diversity Biased Estimation Caused by Intragenomic Heterogeneity and Interspecific Conservation of 16S rRNA Genes.基因组内异质性和 16S rRNA 基因种间保守性导致微生物多样性的有偏估计。
Appl Environ Microbiol. 2023 May 31;89(5):e0210822. doi: 10.1128/aem.02108-22. Epub 2023 Apr 27.
7
How nutrient loading leads to alternative stable states in microbially mediated N-cycle pathways: A new insight into bioavailable nitrogen removal in urban rivers.营养物质负荷如何导致微生物介导的氮循环途径中的替代稳定状态:对城市河流中生物可利用氮去除的新见解。
Water Res. 2023 Jun 1;236:119938. doi: 10.1016/j.watres.2023.119938. Epub 2023 Apr 6.
8
Combined methods elucidate the multi-organ toxicity of cylindrospermopsin (CYN) on Daphnia magna.联合方法阐明了柱孢藻毒素(CYN)对大型溞的多器官毒性。
Environ Pollut. 2023 May 1;324:121250. doi: 10.1016/j.envpol.2023.121250. Epub 2023 Feb 20.
9
Land-Water Transport and Sources of Nitrogen Pollution Affecting the Structure and Function of Riverine Microbial Communities.水陆传输和氮污染来源影响河流微生物群落的结构和功能。
Environ Sci Technol. 2023 Feb 21;57(7):2726-2738. doi: 10.1021/acs.est.2c04705. Epub 2023 Feb 6.
10
Comparison of assembly process and co-occurrence pattern between planktonic and benthic microbial communities in the Bohai Sea.渤海浮游和底栖微生物群落组装过程与共现模式的比较。
Front Microbiol. 2022 Sep 29;13:1003623. doi: 10.3389/fmicb.2022.1003623. eCollection 2022.