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叶片转录组和代谢组分析从古代. 的剪枝再生

Transcriptome and Metabolome Analyses of Leaves from Cutting Rejuvenation of Ancient .

机构信息

Jiangxi Provincial Key Laboratory of Improved Variety Breeding and Efficient Utilization of Native Tree Species (NO.2024SSY04092), Institute of Biological Resources, Jiangxi Academy of Sciences, No. 7777, Changdong Road, Nanchang 330096, China.

出版信息

Int J Mol Sci. 2024 Jul 12;25(14):7664. doi: 10.3390/ijms25147664.

Abstract

Rejuvenation refers to the transition from the state of mature to juvenile. Many ancient have aged and died due to climatic and anthropic factors. Vegetative propagation can protect valuable germplasm resources. In this study, a 2000-year-old ancient and its 2-year-old cutting plantlets were selected as experimental materials. The results indicated that the number of leaves with palisade tissue (Pal) cell layers was different between samples, with two layers in the rejuvenated leaves (RLs) and one layer in the mature leaves (MLs) and young leaves (YLs). Indole-3-acetic acid (IAA), isopentenyladenine (iP) and isopentenyladenosine (iPR) concentrations were significantly higher in RLs than in MLs and YLs, but the abscisic acid (ABA) concentration was lower. Targeted metabolome analysis identified 293 differentially accumulated metabolites (DAMs). Meanwhile, a total of 5241 differentially expressed genes (DEGs) were identified by transcriptome sequencing. According to the KEGG analysis, there were seven important enriched pathways in the MLs, RLs and YLs, including plant hormone signal transduction (57 DEGs), plant-pathogen interaction (56 DEGs) and MAPK signaling pathway-plant (36 DEGs). KEGG enrichment conjoint analyses of DEGs and DAMs identified 16 common pathways. Integrated analyses of cytological, hormone, metabolome and transcriptome elements can provide a research basis in regard to the rejuvenation regulatory mechanism of ancient .

摘要

返老还童是指从成熟状态向幼年状态的转变。许多古代植物由于气候和人为因素而衰老和死亡。营养繁殖可以保护有价值的种质资源。在这项研究中,选择了一棵 2000 年树龄的古代柳树及其 2 年生扦插苗作为实验材料。结果表明,样本之间具有栅栏组织(Pal)细胞层的叶片数量不同,再生叶(RL)有两层,成熟叶(ML)和幼叶(YL)有一层。吲哚-3-乙酸(IAA)、异戊烯腺嘌呤(iP)和异戊烯腺嘌呤核苷(iPR)在 RL 中的浓度明显高于 ML 和 YL,但脱落酸(ABA)的浓度较低。靶向代谢组分析鉴定出 293 种差异积累代谢物(DAMs)。同时,通过转录组测序鉴定出 5241 个差异表达基因(DEGs)。根据 KEGG 分析,在 ML、RL 和 YL 中有七个重要的富集途径,包括植物激素信号转导(57 个 DEGs)、植物-病原体相互作用(56 个 DEGs)和 MAPK 信号通路-植物(36 个 DEGs)。DEGs 和 DAMs 的 KEGG 富集联合分析确定了 16 个共同途径。细胞、激素、代谢组和转录组元素的综合分析可为古代柳树返老还童调控机制的研究提供依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/261a/11277138/d925fda43019/ijms-25-07664-g001.jpg

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