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基于 InterGEN 研究的黑人女性抑郁症状的全基因组关联研究。

Epigenome-Wide Association Study of Depressive Symptoms in Black Women in the InterGEN Study.

机构信息

School of Nursing, Columbia University, New York, NY 10032, USA.

Rory Meyers College of Nursing, New York University, New York, NY 10010, USA.

出版信息

Int J Mol Sci. 2024 Jul 12;25(14):7681. doi: 10.3390/ijms25147681.

Abstract

(1) The prevalence of depression is two times higher in women than men. Black women have an increased risk of depression due to stressors such as low socioeconomic status and perceived discrimination. Depression is likely influenced by both genetic and environmental factors. Psychosocial stressors can influence DNA methylation (DNAm), leading to changes in gene expression and ultimately, depression. The objective of this study was to examine associations between DNAm and depressive symptoms in Black women. (2) This study was a secondary analysis of data from the Intergenerational Impact of Genetic and Psychological Factors on Blood Pressure (InterGEN) Study. Perceived discrimination was assessed using Krieger's Experiences of Discrimination and Waelde's Race-Related Events Scale, and participants were screened for depressive symptoms with the Beck Depression Inventory. Raw data from saliva samples were analyzed using the Illumina Infinium Epic (850 K) BeadChip and then preprocessed in RStudio. (3) Differential methylation analysis identified DNAm sites and regions associated with depressive symptoms. Six DNAm sites had a q-value less than 0.05. Additionally, of the 25 regions identified, 12 were associated with neurological diseases or disorders. (4) These findings suggest that there is a neurological component to depression, which should be considered during treatment.

摘要

(1) 抑郁症的患病率女性是男性的两倍。由于社会经济地位低和感知到的歧视等压力源,黑人女性患抑郁症的风险增加。抑郁症可能受到遗传和环境因素的共同影响。心理社会压力源会影响 DNA 甲基化(DNAm),导致基因表达的变化,最终导致抑郁症。本研究旨在探讨黑人女性 DNAm 与抑郁症状之间的关联。

(2) 本研究是对遗传和心理因素对血压的代际影响(InterGEN)研究数据的二次分析。使用 Krieger 的歧视经历和 Waelde 的种族相关事件量表评估感知歧视,并用贝克抑郁量表对参与者进行抑郁症状筛查。使用 Illumina Infinium Epic(850 K)BeadChip 分析唾液样本的原始数据,然后在 RStudio 中进行预处理。

(3) 差异甲基化分析确定了与抑郁症状相关的 DNAm 位点和区域。有 6 个 DNAm 位点的 q 值小于 0.05。此外,在所确定的 25 个区域中,有 12 个与神经疾病或障碍有关。

(4) 这些发现表明,抑郁症存在神经成分,在治疗过程中应予以考虑。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d813/11277114/7db8fa79fed3/ijms-25-07681-g001.jpg

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